DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and Serpina12

DIOPT Version :10

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:438 Identity:111/438 - (25%)
Similarity:206/438 - (47%) Gaps:52/438 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLVL---LALLPVVTIAAL----DKPELSFLNEFSQIFKGERD----------FSLALMKQIREI 52
            :|||   |.|..::|:..|    |.|:........|.::|::|          |...|::::...
  Rat     2 NLVLGLGLFLAGLLTVKGLLQDRDAPDTYESPVRVQEWRGKKDARELTRHNMEFGFKLLQRLASN 66

  Fly    53 YPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQS 117
            ...||:|.||.|...|..:....:...|..|:.:..|.....::...:..:.|.|:.:.   ...
  Rat    67 SRQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSDRDMHMGFHYLLQKLNR---ETQ 128

  Fly   118 PMELSSANRIFVDRTINVSNKFNTL---LYGATKELDFKNDPETGLKEINDWIADKTHNQIRDML 179
            .:::|..|.:|:|:.:....:|..|   ||.|...|....|.|...|.||.:|:.||||:|.:|:
  Rat   129 DVKMSIGNALFMDQRLRPQQRFLKLAKNLYDADMILTNFQDLENTQKNINKYISRKTHNRIENMV 193

  Fly   180 SSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQ 244
              :.|.|.|:::|.|..|.:|:|..:|..::|..:.|||.|.:...|.||.:.|.:.|..|..|.
  Rat   194 --KNIDPGTVMLLTNYIYFQGRWQYEFDPKQTKEEDFFIEEGKTVKVPMMFQRGMYDMAYDSQLS 256

  Fly   245 SQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQK 309
            ..|:::|||                .:|:...:||:|.|:.|  :...|.||...||......:.
  Rat   257 CTILEMPYR----------------RNITATFVLPDSGKLRL--LEQGLQADIFAKWKSLLSKRV 303

  Fly   310 IELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLT--ADPISLVIDDAQHLAKIKVDEVGS 372
            :::.:|:........:..:||.:|::.:|..:   ||||  :...||.:.:|.|.|:::::|.|:
  Rat   304 VDVWVPRLHISATYNMKKVLSRLGISKIFEEH---GDLTRISSHRSLKVGEAVHKAELRMNEKGT 365

  Fly   373 TAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILF-AGVYS 419
            ..||.:   .:::.....|.:...|.||:.:||:..:.:::| |.:|:
  Rat   366 EGAAGS---GAQTLPMETPRRMKLNAPFLMMIYENLMPSMIFLARIYN 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 101/402 (25%)
Serpina12NP_620180.2 serpinA12_vaspin 40..411 CDD:381026 101/400 (25%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 3/20 (15%)

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