DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and LOC110439158

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:431 Identity:109/431 - (25%)
Similarity:182/431 - (42%) Gaps:73/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LDKPELSFLNEFSQIFKGERDFSLALMKQIREI--YPSGNLFFSPFSTYNALLLAYFSSSEQTER 82
            |.:|.:|  .:...:.....||:..|.|::.|.  |.|.|:|||||:...||......:...|::
Zfish    24 LQQPPIS--AKLPSLININNDFAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGAGGDTKQ 86

  Fly    83 ELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGAT 147
            :|...:....|:        ::..:....|   .|.:| ...||..||..|      .|.||.:.
Zfish    87 QLLSGIGYNSAI--------FSTEEMHQLF---HSLLE-DIGNRTGVDIDI------GTALYASD 133

  Fly   148 K--------------------ELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVL 192
            :                    .:||: ..|| :.:||.::.:|||.:|...:  :::...|::.|
Zfish   134 RFKPHSKFLEDMKEFYHTDGFTVDFR-VKET-VDQINKYVEEKTHGKINQAV--DDLEKDTLMFL 194

  Fly   193 ANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYK 257
            ....|.||:|...|..|:|....|.|:::....|.|||:....|:..|..|..:::.|.|     
Zfish   195 LTYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQMMHQYEYLKVYYDAELSIKVLCLDY----- 254

  Fly   258 SKETHISTPESKSDISMIIILPNSNK-----ISLNRVISRLNADSVKKWFERALPQKIELSLPKF 317
                       ....||.:.:|:.:.     ..|...|||   ..::||...|..:|:::.:||.
Zfish   255 -----------NDSFSMFLAVPDVHMGRKTIEDLEMTISR---QHIEKWKRSAFERKVDIYVPKL 305

  Fly   318 QFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLV 382
            ..:....|..||..||:..||:..|.|..::.:.|  .|....|.|.:.:||.|:||||.|.:..
Zfish   306 SLKTSYFLNDILKGMGMADMFSDKADFTGVSEEKI--FISKVVHKATLDIDEKGTTAAAVTTVQF 368

  Fly   383 SRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPRQ 423
            .:.|..|..| .:.:.||:..|.|:..|.|||.|...:|.:
Zfish   369 RQLSYSPLST-LSFDRPFMIFITDQTNDNILFFGKVVNPNE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 105/407 (26%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 105/406 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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