DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpinb11

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_002936466.1 Gene:serpinb11 / 100490487 XenbaseID:XB-GENE-6039640 Length:401 Species:Xenopus tropicalis


Alignment Length:436 Identity:118/436 - (27%)
Similarity:191/436 - (43%) Gaps:86/436 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQ 98
            |.|...:|||.:.|::.....:.|:||||.|...||.|.:..|.|.|..::             |
 Frog     4 INKSINEFSLDIFKELNSSCENKNIFFSPMSISAALYLLHLGSREDTATQI-------------Q 55

  Fly    99 VLVSYTLAQRQDEFRWR---------QSP------------------------------MELSSA 124
            .:|.|...:::..||.|         :||                              :||..|
 Frog    56 KVVRYPDVKKEGFFRRRCATQQRSNEESPGKDVSECGKVSDAHSKFHALLSKLTEDPKGVELQIA 120

  Fly   125 NRIFVDRTINVSNKF---NTLLYGA-TKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEIT 185
            |.:|.........::   ...||.| .:.:||:.| || .:.||.|:..||..:|:|:.....:.
 Frog   121 NGMFAQMNFPFLQQYLECAQALYNAKLQNVDFEKD-ET-RENINSWVESKTQGKIKDLFEKNSLD 183

  Fly   186 PHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKL 250
            ..|.|||.||.|.||.|.:.|:...|...||::::...:.|.||:::..|.:...:.|.:||::|
 Frog   184 KRTALVLVNAIYFKGIWSNPFQEVHTKDAPFYVSKDVVKSVPMMYQSQKFNLGAIKELNAQILEL 248

  Fly   251 PYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLP 315
            ||:.               ..:||.|:|.| .|..|.::..:|:.:.:.|........|:::.:|
 Frog   249 PYQL---------------GALSMFILLTN-EKFGLQKIEQQLSWNYLAKGMSNMENTKLDVYIP 297

  Fly   316 KFQFEQRLELTPILSLMGVNTMFTR-NATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATI 379
            :|:.|:.|:|...|..||:...|:. .|....::..|  |.:....|.|.::|:|.|:.|||||.
 Frog   298 RFRLEESLDLGSHLINMGMVDAFSEAKANLSGISDVP--LYVSKIVHKAFVEVNEEGTVAAAATG 360

  Fly   380 LLVSRSSRQPD----PTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
            :.::     |.    |..|..:|.|:|.|.|...|||||.|.|..|
 Frog   361 VQIA-----PKMAVIPRVFKADHSFLFFIKDNPNDTILFFGKYESP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 114/428 (27%)
serpinb11XP_002936466.1 serpinB 7..398 CDD:381072 114/428 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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