DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpini1

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_031757359.1 Gene:serpini1 / 100144746 XenbaseID:XB-GENE-948443 Length:428 Species:Xenopus tropicalis


Alignment Length:436 Identity:114/436 - (26%)
Similarity:206/436 - (47%) Gaps:48/436 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTFSLVLLALLPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFST 65
            ||..||:.|.::..:........|.  :||          ||:.:..::|......|:.|||.||
 Frog    19 MHHLSLLALIVMQALVFGTSVHDET--VNE----------FSIKVYHKLRATIEDENIIFSPLST 71

  Fly    66 YNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVD 130
            ..||.:....:...:.:|:...|......|.::..:   |....:....::....||.||.:::.
 Frog    72 AIALGMVELGARGSSLKEIRHVLGYDKLKNGEEFSL---LKDLSNMLTAQEKHYVLSIANSLYLQ 133

  Fly   131 RTINVSNKFNTLL----YGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLV 191
            ...::|:||..|:    ....:.:|| :...|....||.|:.:.|:|:|||::::::.|..|.||
 Frog   134 NGFHISDKFIQLMKKYFKAEVENVDF-SQGSTVANHINMWVENHTNNRIRDLVTADDFTNLTKLV 197

  Fly   192 LANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKM------TIDEGLQSQIIKL 250
            |.||.|.||.|.|||:.|.|....|..::..:..:.||::.|.|..      :.:.|...|:::|
 Frog   198 LVNAMYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQKGEFYYGEFTDGSNEAGGVYQVLEL 262

  Fly   251 PYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLP 315
            ||               ...:||:||:| :..::.|..:...|.|..:::|......||:|:.||
 Frog   263 PY---------------EGDEISLIIVL-SRQEVPLATLEPLLKAPLIEEWANSVKKQKVEVYLP 311

  Fly   316 KFQFEQRLELTPILSLMGVNTMFTRNATFGDLTA--DPISLVIDDAQHLAKIKVDEVGSTAAAAT 378
            :|:.|:.:.|..:|..:|:..:|:..|   ||:|  |...|.:..|.|.:.::|:|.||.|||::
 Frog   312 RFKVEEVVNLKDVLMQLGITKIFSGEA---DLSAVSDSKDLFVAKAVHKSFLEVNEEGSEAAASS 373

  Fly   379 ILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPRQM 424
            .::.:.......| :...:|||.|:|.:.|..::||.|....|..:
 Frog   374 GMIANSRMAVLYP-QVIVDHPFFFVIRNRKTGSVLFMGRVMHPETL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 105/392 (27%)
serpini1XP_031757359.1 serpinI1_NSP 41..412 CDD:381005 108/406 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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