DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Eb and serpine1

DIOPT Version :9

Sequence 1:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_002941247.2 Gene:serpine1 / 100127732 XenbaseID:XB-GENE-969639 Length:403 Species:Xenopus tropicalis


Alignment Length:434 Identity:115/434 - (26%)
Similarity:202/434 - (46%) Gaps:58/434 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLLALLPVVTIAALDKPELSFLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALL 70
            :|||:|..|.          |..|..|::.:....|.|.|.:::.......||.|||:...:||.
 Frog    10 VVLLSLASVT----------SAQNRVSRVAQKGTSFGLRLFQEVLADQWGKNLGFSPYGVTSALS 64

  Fly    71 LAYFSSSEQTERELAQALNLG---W----ALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIF 128
            :....::..|..::.:|||.|   |    ||||.:..:|......:|       |..:..|:.:|
 Frog    65 VLQSGAAGTTLDQIRKALNYGHKEWAVALALNKLREQISGQQKSAED-------PKPVHIADGLF 122

  Fly   129 VDRTINVS----NKFNTLLYGATKELDFKNDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTM 189
            |.|.::::    .:|....:....:::| .|.......||.|:.:||...|:|::.|..|.|.|.
 Frog   123 VQRDLSLTPGFLQRFQATFHRHLSQVNF-TDVAQAKDIINQWVENKTDGMIKDLVGSNNIPPLTR 186

  Fly   190 LVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAF---KMTIDEGLQSQIIKLP 251
            |||.:|.:..|:|...|..:.|..:||:.::.....|.||..||.:   :.|..:|....:|:||
 Frog   187 LVLLSAVHFSGKWTVPFLEKATHQRPFYRSDGSHVQVQMMANTGKYNCSEFTTPDGDFYDVIELP 251

  Fly   252 YRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLNADSVKKWFERALPQKIE--LSL 314
            |               ...::||:|..|....:.|:.:.:.|..:.:.:|  :|..:|:.  |.|
 Frog   252 Y---------------EGEELSMLIAAPYEKNVPLSAITNILTPELIAQW--KAQMKKVTRLLVL 299

  Fly   315 PKFQFEQRLELTPILSLMGVNTMFTR-NATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAAT 378
            |||.....::|...|..:|:..|||: .|.|..|:::. .|.:.:|....|::|.|.|:.|:|||
 Frog   300 PKFSLLSEVDLKKPLERLGITDMFTQETADFSRLSSEK-PLYVSEAFQKIKVEVTEKGTRASAAT 363

  Fly   379 -ILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDP 421
             .:|::|.:    |.:...:|||:|::......|:||.|...:|
 Frog   364 AAILLARMA----PLEVIMDHPFLFMVRHNPTGTLLFVGQVMEP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 106/398 (27%)
serpine1XP_002941247.2 SERPIN 22..403 CDD:294093 108/410 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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