DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6752 and Hnrnpul2

DIOPT Version :9

Sequence 1:NP_001247116.1 Gene:CG6752 / 41826 FlyBaseID:FBgn0038296 Length:1332 Species:Drosophila melanogaster
Sequence 2:NP_001292149.1 Gene:Hnrnpul2 / 309197 RGDID:1562784 Length:745 Species:Rattus norvegicus


Alignment Length:460 Identity:98/460 - (21%)
Similarity:176/460 - (38%) Gaps:130/460 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DHDNLYSDLDDDLEGANCSTVPDPRPAKLADLSVTKQMLIVRTWLDDKFQQ-------------- 70
            :|||...:.|...|.:...|.....|   .|.:|.:|.       ||:..:              
  Rat   144 EHDNGKGEEDGPEERSGDETPGSEAP---GDKAVEEQG-------DDQDSEKSKPAGSDGERRGV 198

  Fly    71 -IQTDSNEEIRRLYME-------TESRIGP-----------DLTIFDVD-YTTTV--RVSSDRLA 113
             .|.|..:|..|.|.|       :.|:..|           |.|:.::| ||:.:  ::|.||..
  Rat   199 KRQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQISKDRYG 263

  Fly   114 ---LRSQGSFNTVRANCCVYGGRWMYEIHLHTKG----------------------VMQIGWASN 153
               |.|: .|.|:.:     |.|..|.:   |||                      ::::||:.:
  Rat   264 GQPLFSE-KFPTLWS-----GARSTYGV---TKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSID 319

  Fly   154 -SCQFNENSGVGDTKSSYGYDGSKQQIWHISTKKYGDKWQIGDVIGVTIDVDKEVIE--YYRNGR 215
             ||     |.:|:.:.|||:||...:..:...:::|..:...||||...:.:...:|  :.:||.
  Rat   320 FSC-----SQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETGEVELSFSKNGE 379

  Fly   216 SMGVAFNKLEKGPGISFFAAISLGYTQGIEANFGNR--PFMYPVSGFQPLMARPILK-------- 270
            .:||||...::..|........|.....||.|||.:  ||..|...|..:.|.|:.:        
  Rat   380 DLGVAFRISKESLGDRALLPHVLCKNCVIELNFGQKEEPFFPPPEEFVFIHAVPVEERVRTAVPP 444

  Fly   271 --LQRANLLMNYLVNLAGIFSKYNAQSGMAPTNGADARVSTKKTVYCIFA-TLLIEKFTNEIFDP 332
              ::...:::  :|.|.|        ||........|:.:.:|....:.| |:|.:.....:.:|
  Rat   445 KTIEECEVIL--MVGLPG--------SGKTQWALKYAKENPEKRYNVLGAETVLTQMRMKGLEEP 499

  Fly   333 YI---IEDVLLRK----ISSMTNLASEKENSYSVLHGLLSLFWNYMEGDEIKFVLRKLVNALLGT 390
            .:   ..|:|:::    :|.:..:||..:.::     :|.....|..|...|.:|.|       |
  Rat   500 EMDPKSRDLLVQQASQCLSKLVQIASRSKRNF-----ILDQCNVYNSGQRRKLLLFK-------T 552

  Fly   391 FTHTI 395
            |:..:
  Rat   553 FSRKV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6752NP_001247116.1 SPRY_RNF123 122..249 CDD:293940 35/151 (23%)
zf-C3HC4_3 1261..1309 CDD:290631
Hnrnpul2NP_001292149.1 SAP 3..37 CDD:128789
SPRY_hnRNP 244..415 CDD:293942 46/184 (25%)
NK 452..>634 CDD:302627 24/128 (19%)
AAA_33 452..597 CDD:290396 24/128 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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