DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6752 and rnf123

DIOPT Version :9

Sequence 1:NP_001247116.1 Gene:CG6752 / 41826 FlyBaseID:FBgn0038296 Length:1332 Species:Drosophila melanogaster
Sequence 2:XP_002936521.2 Gene:rnf123 / 100127191 XenbaseID:XB-GENE-923134 Length:1306 Species:Xenopus tropicalis


Alignment Length:1361 Identity:433/1361 - (31%)
Similarity:659/1361 - (48%) Gaps:241/1361 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FQQIQTDSNEEIRRLYM--ET---------ESRIGPDLTIFDVDYTT----TVRVSSDRLALRSQ 117
            ||.::    |.:.||..  ||         |.|:||...:  :|:|:    .:.|..|.|.:...
 Frog    61 FQNLE----EHLERLVSAGETTEDDTDQAAEGRLGPSTVV--LDHTSGFEGLLLVDDDLLGVIGH 119

  Fly   118 GSFNTVRANCCVYGGRWMYEIHLHTKGVMQIGWASNSCQFNENSGVGDTKSSYGYDGSKQQIWHI 182
            .:|:::||..|||.|:|:||:.:.::|:|||||.:.||:||:..|||||..||.|||::.:.|::
 Frog   120 SNFSSIRATTCVYKGKWLYEVLISSQGLMQIGWCTLSCRFNQEEGVGDTPDSYAYDGNRVRKWNV 184

  Fly   183 STKKYGDKWQIGDVIGVTIDVDKEVIEYYRNGRSMGVAFNKLEKGPGISFFAAISLGYTQGIEAN 247
            :|..||..|..||::...||:|:..|.:..||.|:|.||:.:.:|.|:::|.||||.:.:.:..|
 Frog   185 TTTNYGKSWAAGDIVSCLIDLDEGTISFCLNGVSLGTAFSDISRGSGMAYFPAISLSFKESVAFN 249

  Fly   248 FGNRPFMYPVSGFQPLMARPILKLQRANLLMNYLVNL--AGIFSKYNAQSG-MAPTNGADARVST 309
            ||:||..|||.|::||...|...|.::..||.||.|.  .||    :.|.| :...:.|..::..
 Frog   250 FGSRPLRYPVEGYRPLQDPPTADLLKSQRLMGYLKNTLRTGI----DVQEGKLVDKDPATWQLQG 310

  Fly   310 KKTVYCIFATLLIEKFTNEIFDPYIIEDVLLRKISSMTNLASEKENSYSVLHGLLSLFWNYMEGD 374
            :.|:....|. :..:|...:...|::||||:..:..:.......|....:.| ||.|.|..||..
 Frog   311 EPTILITLAH-IFNQFAPLMCKVYLVEDVLINFLLGILEKGGAVEEHPLIQH-LLDLMWLLMEDY 373

  Fly   375 EIKFVLRKLVNALLGT--FTHTIQGLDYEKH--RQALGMLHCLCLHEQTRKYLLEGKLFK-KHCL 434
            ||...|::|:.:||..  |:..:..|..:.|  |..:.:|.    ||::|||||...||. ...:
 Frog   374 EIHECLKQLMMSLLRAYRFSPIVPDLGLQIHYLRLTIAILR----HEKSRKYLLSNVLFDVLRSV 434

  Fly   435 AFFLYIHPL--EFYIMEELLPDSMAW-----TEG--IDGPKEK----------YLNVVEKVRKVT 480
            .||....||  |...::||:|.:. |     .||  |..|.|:          |.....:::|..
 Frog   435 VFFFIKCPLRVEEAGLQELIPTTW-WPNRFNKEGKEIRDPSEESGEERLRRRAYERGCMRLKKRI 498

  Fly   481 EPLYTAQKDLLCTLMINSD-GSRESPSSRSIFLSKLRRYVIDLSMEQRPFHAFFFMQSSIQHPLD 544
            |.:...|..:|..|:.|.| |..|  :||.|||:|.|:                |:|.:..:..:
 Frog   499 EVVEELQVQILRLLLNNKDKGGGE--ASRYIFLNKFRK----------------FLQENASNRGN 545

  Fly   545 APV------ALAFASILIDQTRSMFKDEMPTKN-VEVNSD-------YFIDGTFDYMHFDRVGGV 595
            ..|      .:.|...||...||.: ||...:| :...||       .|.:|..||....|:||:
 Frog   546 PTVLCPPEYMVCFLHRLISALRSCW-DEYKIRNPLACGSDEAYVPPQLFYNGKVDYFDLQRLGGL 609

  Fly   596 LSHLRKVHRGDIDAR----LGSARTQQI------YEDDRQNLRVNEVDTTLYLLGENIN----NV 646
            ||||||..:.::.|:    :..:..|.:      .||:..|.........|.:.|....    :.
 Frog   610 LSHLRKTLKDELAAKANIVIDPSELQAVTMDDLEEEDESANTTAQRSSAALAIGGALARPSWLSS 674

  Fly   647 PVVGHTQGANNTTYTHFLN-TRPNSSTDS-----------------------------SPGNAD- 680
            |.:|......:|.....:| .||..:.|.                             .|..|| 
 Frog   675 PTLGRANRFLSTAAVSLMNPRRPLGALDKVKVRSLSVDQRTEDDIEGQHGNDGLLLGRPPEEADT 739

  Fly   681 --MEASLCELLDLCIIFYYSAGHKYIVKIATVRDEIAALNEVLKETKFYREDIERKLGALEQHAN 743
              .|.||.|:||..::.|..:.|:.:.|:..|.|::......||:|:   |.|:|          
 Frog   740 VITENSLLEILDGAVMMYNLSVHQQLGKMVGVSDDVNEYALALKDTE---EKIKR---------- 791

  Fly   744 VCMNENHQHVMGELRSKFSQRQNVFATRSIALARKQVWLRGVALNNHRRSLLIWLLERMLRTLTT 808
             | .:....:|.||    .:.|.||:.:...|:|:..|:.....:..:...:.|||:..||::..
 Frog   792 -C-PKRRADIMDEL----VKSQRVFSEKLNHLSRRLAWINVTIYSKDKMQDIYWLLQVCLRSIEH 850

  Fly   809 ASNTGSLFSFVPEVYVNTLPILLDAVMDFSHHDLKAQF-------EASDAECSVNAAAEFLGIHS 866
            |..|||||:|:||.|:|        |...|::.||..|       |....|.::...|..|..|.
 Frog   851 ADRTGSLFAFMPEFYLN--------VAMNSYNALKNYFSPVSSMEELQGYEETLTRLATILAKHF 907

  Fly   867 ADPRIVLASCKDSLLQALGTLTCHKSGVRALERTSKRSQASLVRALLRPYENRAWGQSNWLLLRF 931
            ||||||....||||:|||.:..|:...:||:||.|:..|.|:::.||.|||.|.|.|:||:|:|.
 Frog   908 ADPRIVGTDIKDSLMQALASYVCYPHSLRAVERISEEQQISMMKNLLAPYEQRPWAQTNWILVRL 972

  Fly   932 WMGEGYAYKDSRQPSVW----QGGSLPLHQGLCRSRSRNETHTGLLHNVAPANPSKHFQRLIGAK 992
            |.|.|:.|:.:|.|.:.    :..:||..|..|.|.        ||.|        |.     |:
 Frog   973 WRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPST--------LLQN--------HM-----AE 1016

  Fly   993 LLEDEP-FATAFLNSVLSQLNWAFSEFILLLQEIQNTAQRQENTLFEPKQLKICSMCFELTVSLM 1056
            ||..:| .|::||||||:||||||||||.::||||..|:|.|....:.:|||:|:.||:|:|||:
 Frog  1017 LLRGDPELASSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLL 1081

  Fly  1057 RCLEMVITTAPEIVTDESRPNSDLLLNRICQLISQVLSRVTVPPGCFQFVVDMCSADLNAVTHYP 1121
            |.|||.:|..|:|..|.||.:|:|||.|:.||::|||:|||.....|..||::....|.:|.|||
 Frog  1082 RVLEMTVTLVPDIFLDWSRSSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESVDHYP 1146

  Fly  1122 IVTAALGILLALMQEEMESDLRPQIVTRVSRAFLTDPSFQFATLEFALGEIRTPLLEQKNIPRGN 1186
            |:.|..|||:.|:     .|...|.:.|.:...|.||.||..::::.||:....:|       |.
 Frog  1147 ILVAVTGILVRLL-----VDSSSQGIQRATAVLLADPCFQLRSIQYLLGQAEQSVL-------GA 1199

  Fly  1187 FDPSS-RPHIDPLTNDVRVPLPNNSKRIRADPPILKFALNDFPSHVSSEEIDNVRRLIDSLRVKQ 1250
            ..||: :.|                           |:|..:..::::||:..|..::..|..:.
 Frog  1200 GPPSADKKH---------------------------FSLQAYTDYINAEELGKVSNMLAHLSEES 1237

  Fly  1251 TLLSDITLP-SEDSLCPICCAKPITAVFTPCKHQSCSDCIMQHMMNSKVCFYCKTTIQTIE 1310
            ...:..|.| ||:.|||||.|.||:|||.||.|:||..||.||:||:|.||:||.||..::
 Frog  1238 KQAAAATQPTSEEDLCPICYAHPISAVFKPCSHKSCKACINQHLMNNKDCFFCKATITGVD 1298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6752NP_001247116.1 SPRY_RNF123 122..249 CDD:293940 54/126 (43%)
zf-C3HC4_3 1261..1309 CDD:290631 30/47 (64%)
rnf123XP_002936521.2 SPRY_RNF123 124..251 CDD:293940 54/126 (43%)
RING-HC_RNF123 1251..1291 CDD:319455 25/39 (64%)
RING-HC finger (C3HC4-type) 1253..1290 CDD:319455 24/36 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 355 1.000 Domainoid score I986
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11112
Inparanoid 1 1.050 571 1.000 Inparanoid score I1044
OMA 1 1.010 - - QHG60087
OrthoDB 1 1.010 - - D133044at33208
OrthoFinder 1 1.000 - - FOG0006357
OrthoInspector 1 1.000 - - oto104259
Panther 1 1.100 - - LDO PTHR13363
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5412
SonicParanoid 1 1.000 - - X5310
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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