DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and Gucy2d

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_077356.1 Gene:Gucy2d / 79222 RGDID:620438 Length:1108 Species:Rattus norvegicus


Alignment Length:283 Identity:118/283 - (41%)
Similarity:172/283 - (60%) Gaps:30/283 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 QQKSKKLEESMR----LLDEEMRRTDELLYQMIPKQVADRLRRGEN--PIDTCEMFDSVSILFSD 426
            :|.|..||:.:|    .|::|.::||.||.||:|..||:.|:.|.:  |    |.|:.|::.|||
  Rat   828 EQYSSNLEDLIRERTEELEQEKQKTDRLLTQMLPPSVAEALKMGTSVEP----EYFEEVTLYFSD 888

  Fly   427 IVTFTEICSRITPMEVVSMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDA-NHAERVC 490
            ||.||.|.:...|:|||.:||.:|::||.:...:.|||||||||||||.:|.|.::. .||..:.
  Rat   889 IVGFTTISAMSEPIEVVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMVASGLPQRNGQRHAAEIA 953

  Fly   491 DMALDMVDAITDLKDPSTGQHL-----RIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMES 550
            :|:||::.|:...:    .:|:     |||:|:|||..|||:|||.|||||||||||||||||||
  Rat   954 NMSLDILSAVGSFR----MRHMPEVPVRIRIGLHSGPCVAGVVGLTMPRYCLFGDTVNTASRMES 1014

  Fly   551 TSIAMKVHISEST-KVL--IGPNYKIIERGEIDVKGKGTMGTYWLEER---ENRLP----LQLTA 605
            |.:..::|::.|| ::|  :...:::..||..::||||...||||..|   ...:|    ||..|
  Rat  1015 TGLPYRIHVNMSTVRILRALDQGFQMECRGRTELKGKGVEDTYWLVGRVGFNKPIPKPPDLQPGA 1079

  Fly   606 ALQVHPLSPVPPTPTPKTKAIMP 628
            :.....|..:||....|.:...|
  Rat  1080 SNHGISLQEIPPERRKKLEKARP 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572
HNOBA 201..404 CDD:311573 16/39 (41%)
CYCc 383..571 CDD:214485 92/198 (46%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy2dNP_077356.1 PBP1_sensory_GC_DEF-like 58..434 CDD:380594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..552
PK_GC-2D 540..814 CDD:270945
HNOBA <823..868 CDD:400168 16/39 (41%)
CYCc 848..1039 CDD:214485 92/198 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1069..1108 9/34 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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