DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc88E and si:ch211-132f19.7

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:XP_688903.4 Gene:si:ch211-132f19.7 / 560410 ZFINID:ZDB-GENE-130530-619 Length:1183 Species:Danio rerio


Alignment Length:518 Identity:126/518 - (24%)
Similarity:225/518 - (43%) Gaps:113/518 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 KEMHIE----LVREEILFDTVHVTFQLTFDNRAFTLASLAMTREEKHLPISAHVLFEIFPFCMVF 218
            |:.|||    .:|:|:....:..:|.|..    |.:|:.|:....:..|:....|..:|.:.:| 
Zfish   652 KDTHIEGKFSQMRDEM
FKSNLACSFLLLL----FIMAAQALIPSPQFFPMIIQFLVFLFVYMLV- 711

  Fly   219 GADMVVRSIGNSLMVILPELLGKK------ITAWFDLVRPLIAFKFQTILNRTNNIFELVTVDPV 277
                        |:|.|.|...:.      :..|               ::.|.:|..|:|:..:
Zfish   712 ------------LLVTLAEEFKRSPPYLQHLCCW---------------IHETKSIRNLLTLTAI 749

  Fly   278 TERFDVQN----------EDLLQHEDGSEPEKS-----------LRLKGQMVYMENWRMIMFLGT 321
            ...|.|.:          |:..:....||..|.           ..|.| :|.|....:.:.|..
Zfish   750 AINFGVASCNIFWCNGTFEETEKSNKNSEHGKQWPVNICTHPEFFVLSG-VVAMVTCAVFLRLSC 813

  Fly   322 PV-MPDLTSLITTGLYINDLSMHD-FSRDLMLAGTQQSVELK----------LALDQEQQKSKKL 374
            .: :..||.:|....|:.:::.|. |.|....:..|:|..|:          :.:......|::|
Zfish   814 LLKLAVLTLVIAVYTYLIEVAFHVLFIRQHQNSQIQRSQYLRRKGISVLLMAMFVVVVLYNSRQL 878

  Fly   375 EESMRLLD--------------EEMRRTDE-LLYQMIPKQVADR-LRRGENPIDT-CEMFDSVSI 422
            |.:.| ||              :|:|..:| |||.::|..||.. |.|..|..|. .|.::.|.:
Zfish   879 ETTSR-LDFLWRLQARQEVEDMKELREHNECLLYNILPAHVARHFLERDRNNEDLFSESYERVGV 942

  Fly   423 LFSDIVTFTEICSR----ITPMEVVSMLNAMYSIFDKLTER---NSVYKVETIGDAYMVVAG-AP 479
            :|:.|..|::...:    ...:|.:.:||.:.:.||:|.:.   ..:.|::|||..||..:| :|
Zfish   943 MFASIPGFSDYYEKKELIHQDVECLRLLNEIIADFDELLDEPYFQDIEKIKTIGSCYMAASGLSP 1007

  Fly   480 DK-----DANHAERVCDMALDMVDAITDLKDPSTGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFG 539
            :|     :..|...:...||.|.:.:.:: :..|.....:|||:..|.||||::|...|:|.::|
Zfish  1008 EKQECEDEWAHLSTLVLFALAMQETLKEI-NKRTSNDFWLRVGISHGPVVAGVIGATKPQYDIWG 1071

  Fly   540 DTVNTASRMESTSIAMKVHISEST-KVLIGPNYKIIERGEIDVKG----KGTMGTYWLEEREN 597
            .|||.||||:||.::.::.:.|:| :||....:.:..||||.|||    :|.:.||::..||:
Zfish  1072 MTVNLASRMDSTGLSGRIQVPEATSRVLAEHGFMLQLRGEIYVKGVSERRGAVRTYFVSSREH 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 4/9 (44%)
HNOBA 201..404 CDD:311573 49/257 (19%)
CYCc 383..571 CDD:214485 63/204 (31%)
Herpes_ICP4_C 794..>955 CDD:332854
si:ch211-132f19.7XP_688903.4 AC_N <133..375 CDD:292831
CYCc 338..537 CDD:214485
Guanylate_cyc 381..559 CDD:278633
DUF1053 579..667 CDD:283888 5/14 (36%)
CYCc 903..1103 CDD:214485 62/200 (31%)
Guanylate_cyc 932..1131 CDD:278633 60/199 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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