DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and Gucy1a1

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_058786.2 Gene:Gucy1a1 / 497757 RGDID:68436 Length:690 Species:Rattus norvegicus


Alignment Length:628 Identity:186/628 - (29%)
Similarity:311/628 - (49%) Gaps:106/628 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VYPE----NL-LQK-LAK-KAQQVLGVSERDFMDQM--------GVYFVGFVGQYGY-------- 82
            ::||    || ||: ||| |.::....||::.::::        ||.........|.        
  Rat    81 IFPEFERLNLALQRTLAKHKIKENRNSSEKEDLERIIAEEAIAAGVPVEALKDSLGEELFKICYE 145

  Fly    83 --DRVLSVLGRHMRDFLNGLDNLHEYLKFS--------YPRMRAPSFICENETKQGLTLHYRSKR 137
              :.:|.|:|..::||||....|   ||.|        ..|:...|.:|.::.:..|.::|...:
  Rat   146 EDEHILGVVGGTLKDFLNSFSTL---LKQSSHCQEAERRGRLEDASILCLDKDQDFLNVYYFFPK 207

  Fly   138 RGFVYYTMGQIREVARYFYHKEMHIEL--------------VREEILFDTVHVTFQLTFDNRAFT 188
            |.......|.|:..||..|  |.|:|:              |.:..|..:|||         ..|
  Rat   208 RTTALLLPGIIKAAARILY--ESHVEVSLMPPCFRSECTEFVNQPYLLYSVHV---------KST 261

  Fly   189 LASLAMTREEKHLPISAHVLFEIFPFCMVFGADMVVRSIGNSL--MVILPELLGK-KITAWFDLV 250
            ..||:..:.:..|.|...:..:.|||..:...|:.:..:||.:  :|...:..|| ....:|:::
  Rat   262 KPSLSPGKPQSSLVIPTSLFCKTFPFHFMLDRDLAILQLGNGIRRLVNKRDFQGKPNFEEFFEIL 326

  Fly   251 RPLIAFKFQTILNRTNNIFELVTVDPVTERFDVQNEDLLQHEDGSEPEKSLRLKGQMVYMENWRM 315
            .|.|...|..|:...|..| ::.|    .|:|    :|::     :..:.:.|||||:|:.....
  Rat   327 TPKINQTFSGIMTMLNMQF-VIRV----RRWD----NLVK-----KSSRVMDLKGQMIYIVESSA 377

  Fly   316 IMFLGTPVMPDLTSLITTGLYINDLSMHDFSRDLMLAGTQQSVE--LKLALDQEQQKSKKLEESM 378
            |:|||:|.:..|......|||::|:.:|:..||::|.|.|...:  ||..|.   :....||.:.
  Rat   378 ILFLGSPCVDRLEDFTGRGLYLSDIPIHNALRDVVLIGEQARAQDGLKKRLG---KLKATLEHAH 439

  Fly   379 RLLDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIVTFTEICSRITPMEVV 443
            :.|:||.::|.:||..:.|.:||.:|.:|:  |...:.|:.|::||||||.||.|||:.:|::|:
  Rat   440 QALEEEKKKTVDLLCSIFPSEVAQQLWQGQ--IVQAKKFNEVTMLFSDIVGFTAICSQCSPLQVI 502

  Fly   444 SMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDANHAERVCDMALDMVDAITDLKDPST 508
            :||||:|:.||:......|||||||||||.|..|...:...||.::..|||.|::...::..|. 
  Rat   503 TMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHRESDTHAVQIALMALKMMELSNEVMSPH- 566

  Fly   509 GQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISESTKVLIG--PNY 571
            |:.:::|:|:|||:|.||:||:|||||||||:.|..|::.||.|:..|:::|.:|..|:.  |.:
  Rat   567 GEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGF 631

  Fly   572 KIIERGE--------IDVKG----------KGTMGTYWLEERE 596
            ....|..        .|:.|          :|.....|.::::
  Rat   632 VFTPRSREELPPNFPSDIPGICHFLDAYQHQGPNSKPWFQQKD 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 39/155 (25%)
HNOBA 201..404 CDD:311573 58/207 (28%)
CYCc 383..571 CDD:214485 83/189 (44%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy1a1NP_058786.2 HNOB <111..234 CDD:285002 28/127 (22%)
HNOBA 276..465 CDD:285003 57/205 (28%)
CYCc 444..633 CDD:214485 83/191 (43%)
Guanylate_cyc 471..642 CDD:278633 73/171 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245586at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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