DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and Gyc89Db

DIOPT Version :10

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster


Alignment Length:675 Identity:229/675 - (33%)
Similarity:348/675 - (51%) Gaps:90/675 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGLLLENLSEYIKSVYGEEKWEDIRRQAGIDSPSFSVHQVYPENLLQKLAKKAQQVLGVSERDF 65
            |||:|.|::..||:..||.|.|..:.:.......||..||:||:.|:...|.......|.|....
  Fly     1 MYGMLYESVQHYIQQEYGMETWRKVCQIVDCKHQSFKTHQIYPDKLMPDFAAALSASTGESFDFC 65

  Fly    66 MDQMGVYFVGFVGQYGYDRVLSVLGRHMRDFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLT 130
            |:..|..||.|...:|||:::...||:..|||..:||:|..::|:||:|::||....|....|..
  Fly    66 MNFFGRCFVRFFSNFGYDKMIRSTGRYFCDFLQSIDNIHVQMRFTYPKMKSPSMQLTNMDDDGAV 130

  Fly   131 LHYRSKRRGFVYYTMGQIREVARYFYHKEM-----------------HIELVREEILFDTVHVTF 178
            :.|||.|.|...|.:||:.|||:.||..:|                 .|:|....:   ||.|.:
  Fly   131 ILYRSGRTGMSKYLIGQMTEVAKEFYGLDMTAYVLESQNDICGGTAGPIKLTEGPL---TVIVKY 192

  Fly   179 QLTFDNR---AFTLASLAMTREEKHLPISAHVLFEIFPFCMVFGADMVVRSIGNSLMV------- 233
            :|.||||   |..:..:|...:.|...:..:|..|:|||.:|...||.:...|..::.       
  Fly   193 RLDFDNRDYMAKRVNVIAHPSQLKMPSVDLNVFLELFPFTIVLDHDMKITLAGEKIVETWILHNP 257

  Fly   234 -ILPE-LLGKKITAWFDLVRPL-IAFKFQTILNRTNNIFELVTVDPVTER--------FDVQNED 287
             :.|: .:|..|...|...||. ...:::|||.....:||...:.....|        ||.:|.|
  Fly   258 GVNPKTFIGSHILERFKCRRPKDTQIQWETILQMRTVLFEFELIRTGHNRAAYDAALNFDFENFD 322

  Fly   288 ------------------------------LLQHEDGSEPE----------KSLRLKGQMVYMEN 312
                                          ....:|..:|.          :|:.|||||.|:::
  Fly   323 EASSLNEAQAMALASAKEFSAENAKEEAAAAATSKDEIDPATGQRRHSVGLRSILLKGQMFYIKD 387

  Fly   313 WRMIMFLGTPVMPDLTSLITTGLYINDLSMHDFSRDLMLAGTQQSVELKLALDQEQQKSKKLEES 377
            ...::||.:|::.:|..|...|||:|||:.|..||:|::||.|...:|::..::|:|:|.:||:|
  Fly   388 VDSLIFLCSPLIENLDELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKS 452

  Fly   378 MRLLDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIVTFTEICSR--ITPM 440
            :.|.|...|:.|||||.|||:.:|:|:|:.|..:  |:.|:.||::|.:::...:..|.  ...|
  Fly   453 LELADSWKRQGDELLYSMIPRPIAERMRKSEEHV--CQSFEEVSVIFIEVMNIYDSGSNNIQDAM 515

  Fly   441 EVVSMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDANHAERVCDMALDMVDAITDLKD 505
            :.|:.||.::|..|:......||||||:|..||.|:||||.:..|||..||:||.::..:.....
  Fly   516 QAVTTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLALRVMKKVKAHAL 580

  Fly   506 PSTGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISESTKVLIGP- 569
            |.    :.||||::||.||||:||:|:||||||||||||||||||:|....:.:|..|.:.:.. 
  Fly   581 PG----VAIRVGINSGPVVAGVVGMKVPRYCLFGDTVNTASRMESSSDPWMIQLSNYTALKVQKV 641

  Fly   570 NYKIIERGEIDVKGKGTMGTYWLEE 594
            .||:..||.:.|||||.|.||||.|
  Fly   642 GYKVEARGFVKVKGKGEMETYWLLE 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..163 CDD:462233 58/177 (33%)
HNOBA 201..404 CDD:462234 71/260 (27%)
CYCc 383..571 CDD:214485 81/190 (43%)
PHA03307 794..>955 CDD:223039
Gyc89DbNP_650551.1 HNOB 2..161 CDD:462233 57/158 (36%)
HNOBA 218..479 CDD:462234 71/260 (27%)
Nucleotidyl_cyc_III 488..665 CDD:448371 80/180 (44%)
Blue background indicates that the domain is not in the aligned region.

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