DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and Gyc89Da

DIOPT Version :10

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001036718.1 Gene:Gyc89Da / 42001 FlyBaseID:FBgn0038435 Length:667 Species:Drosophila melanogaster


Alignment Length:676 Identity:233/676 - (34%)
Similarity:355/676 - (52%) Gaps:95/676 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGLLLENLSEYIKSVYGEEKWEDIRRQAGIDSPSFSVHQVYPENLLQKLAKKAQQVLGVSERDF 65
            |||:|.|::..|::..||.:.|..:.........||..||:||:.|:..:|:......|.|....
  Fly     1 MYGMLYESVQHYVQEEYGVDIWRKVCHIIDCKHNSFKTHQIYPDKLMPDIAEALSACTGESFDFC 65

  Fly    66 MDQMGVYFVGFVGQYGYDRVLSVLGRHMRDFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLT 130
            |:..|..||.|...:|||:::...||:..|||..:||:|..::|:||:|::||....|....|..
  Fly    66 MNFFGRCFVRFFSNFGYDKMIRSTGRYFCDFLQSIDNIHLIMRFTYPKMKSPSMQLTNMDDNGAV 130

  Fly   131 LHYRSKRRGFVYYTMGQIREVARYFYHKEMHIELVREE-----------ILFD---TVHVTFQLT 181
            :.|||.|.|...|.:||:.||||.||..|:...::..:           .|.|   ||.|.::|.
  Fly   131 ILYRSSRTGMSKYLIGQMTEVAREFYGLEIKAYVIESQNDISGGTAGPIKLTDGPLTVIVKYRLD 195

  Fly   182 FDNRAFTLASLAMTREEKH-----LP-ISAHVLFEIFPFCMVFGADMVVRSIGNSLMVIL----- 235
            ||||.: :|....|  |.|     :| :...|..::|||..|...||.:...|..::...     
  Fly   196 FDNREY-MAKRVNT--EAHPSQLKMPTVKLDVFLDLFPFTFVLNHDMKITHAGEKIVETWIMHNP 257

  Fly   236 ----PELLGKKITAWFDLVRP--------------LIAFKFQTIL---NRT------NNIFE--- 270
                ...:|..:...|...||              .:.|:|:.|.   ||.      |..||   
  Fly   258 GANPKSFIGTHVMDLFQCRRPKDTTIDWDTLIQMRAVLFEFELIRTGHNRAAYDAVLNMDFENYD 322

  Fly   271 -----------LVTVDPVTERFDVQNEDLLQHED---------GSEPEKSLRLKGQMVYMENWRM 315
                       |......:|...|.:::..:.::         .|:..:|:.|||||.|:::...
  Fly   323 EMDLNEAQTMALAKAQEFSESHPVDDDESAREDEIDPATGERRSSQGLRSILLKGQMFYIKDVDS 387

  Fly   316 IMFLGTPVMPDLTSLITTGLYINDLSMHDFSRDLMLAGTQQSVELKLALDQEQQKSKKLEESMRL 380
            ::||.:|::.:|..|...|||:|||:.|..||:|::||.|...:|::..::|:|:|.:||:|:.|
  Fly   388 LIFLCSPLIENLDELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKSLEL 452

  Fly   381 LDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIV-TFTEICSRIT-PMEVV 443
            .|...|:.|||||.|||:.:|:|:|..|..:  |:.|:.||::|.::: .:.|..:.|. .|:.|
  Fly   453 ADSWKRQGDELLYSMIPRPIAERMRLSEEQV--CQSFEEVSVIFLEVMNVYDEGLNSIQGAMQTV 515

  Fly   444 SMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDANHAERVCDMALDMVDAIT--DLKDP 506
            :.||.::|..|:......||||||:|..||.|:||||.:..|||..||:||.::....  |:.| 
  Fly   516 NTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLALRVMKKFKAHDMGD- 579

  Fly   507 STGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISEST--KV-LIG 568
                 :.||||::||.||||:||.|:||||||||||||||||||:|...|:.:|:.|  || .:|
  Fly   580 -----VAIRVGINSGPVVAGVVGQKVPRYCLFGDTVNTASRMESSSDPWKIQLSKYTGDKVRQVG 639

  Fly   569 PNYKIIERGEIDVKGKGTMGTYWLEE 594
              ||:..||.:.|||||.|.||||.|
  Fly   640 --YKVESRGTVQVKGKGDMETYWLLE 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..163 CDD:462233 57/160 (36%)
HNOBA 201..404 CDD:462234 69/258 (27%)
CYCc 383..571 CDD:214485 87/194 (45%)
PHA03307 794..>955 CDD:223039
Gyc89DaNP_001036718.1 HNOB 2..161 CDD:462233 57/158 (36%)
HNOBA 218..476 CDD:462234 69/257 (27%)
Nucleotidyl_cyc_III 485..662 CDD:448371 86/184 (47%)
Blue background indicates that the domain is not in the aligned region.

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