DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and Gucy2c

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_037302.1 Gene:Gucy2c / 25711 RGDID:2771 Length:1072 Species:Rattus norvegicus


Alignment Length:648 Identity:191/648 - (29%)
Similarity:285/648 - (43%) Gaps:145/648 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEKWEDIRRQAGIDSPSFSVHQVYPENLLQKLAKKAQQV-LGVSE---RDFMDQMGVYFVGFVGQ 79
            ::||..|        ||        ||:......:...| |.:.:   ||.:.:        |.|
  Rat   464 QKKWSHI--------PS--------ENIFPLETNETNHVSLKIDDDRRRDTIQR--------VRQ 504

  Fly    80 YGYDRVLSVLGRHMRDFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLTLHYRSKRRGFV-YY 143
            ..||:...:|    :|..:...|..|..|....::....:.  |.||...|:...::..|.| |.
  Rat   505 CKYDKKKVIL----KDLKHCDGNFSEKQKIELNKLLQSDYY--NLTKFYGTVKLDTRIFGVVEYC 563

  Fly   144 TMGQIREVARYFYHKEMHIELVREEILFDTVHV---TFQLTFDNRAFTLASLAMTREEKH-LPIS 204
            ..|.:|||                  |.||:..   || :.::.:...|..:|......| ..|.
  Rat   564 ERGSLREV------------------LNDTISYPDGTF-MDWEFKISVLNDIAKGMSYLHSSKIE 609

  Fly   205 AHVLFEIFPFCMVFGADMVVRSIGNSLMVILPELLGKK--ITAWFDLVRPLIAFK---------F 258
            .|...: ...|:| .:.|||:........|||.   ||  .||...|.:..|:.|         .
  Rat   610 VHGRLK-STNCVV-DSRMVVKITDFGCNSILPP---KKDLWTAPEHLRQATISQKGDVYSFSIIA 669

  Fly   259 QTILNRTNNIFELVTVDPVTERFDVQNEDLLQHED--GSEP-----------EKSLRLKGQMVYM 310
            |.|:.|....:.|...|        |||.:.:.|:  |::|           ||.|.:  .::..
  Rat   670 QEIILRKETFYTLSCRD--------QNEKIFRVENSYGTKPFRPDLFLETADEKELEV--YLLVK 724

  Fly   311 ENWRMIMFLGTPVMPDLTSLITT-----GLYINDLSMHDFSRDLMLAGTQQSVELKLALDQEQQK 370
            ..|..    .....||...:.:|     ||:      ||...:..:....:.::|     ..:..
  Rat   725 SCWEE----DPEKRPDFKKIESTLAKIFGLF------HDQKNESYMDTLIRRLQL-----YSRNL 774

  Fly   371 SKKLEESMRLLDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIVTFTEICS 435
            ...:||..:|...|..|.|.|.:.::|:.|...|:  |..|...|:::.|:|.|||||.||.||.
  Rat   775 EHLVEERTQLYKAERDRADHLNFMLLPRLVVKSLK--EKGIVEPELYEEVTIYFSDIVGFTTICK 837

  Fly   436 RITPMEVVSMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDAN-HAERVCDMALDMVDA 499
            ..||||||.|||.:|..||::.:.:.|||||||||||:|.:|.|.::.| ||..:..||||::..
  Rat   838 YSTPMEVVDMLNDIYKSFDQIVDHHDVYKVETIGDAYVVASGLPMRNGNRHAVDISKMALDILSF 902

  Fly   500 ITDLK-DPSTGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISEST 563
            :...: :...|..:.||:|||||...||:||:|||||||||||||||||||||.:.:::|:|.||
  Rat   903 MGTFELEHLPGLPVWIRIGVHSGPCAAGVVGIKMPRYCLFGDTVNTASRMESTGLPLRIHMSSST 967

  Fly   564 KVLIGPN-----YKIIERGEIDVKGKGTMGTYWL---EERENRLPLQLTAALQVHPLSPVPPT 618
            ..::...     |::  |||..:||:||..||||   :::|..|              |.|||
  Rat   968 IAILRRTDCQFLYEV--RGETYLKGRGTETTYWLTGMKDQEYNL--------------PTPPT 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 31/149 (21%)
HNOBA 201..404 CDD:311573 49/231 (21%)
CYCc 383..571 CDD:214485 91/194 (47%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy2cNP_037302.1 Periplasmic_Binding_Protein_Type_1 34..414 CDD:299141
PKc_like 479..749 CDD:304357 67/321 (21%)
STYKc 501..744 CDD:214568 62/294 (21%)
CYCc 787..978 CDD:214485 91/192 (47%)
Guanylate_cyc 814..1001 CDD:278633 94/188 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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