DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and daf-11

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_505960.3 Gene:daf-11 / 179605 WormBaseID:WBGene00000907 Length:1077 Species:Caenorhabditis elegans


Alignment Length:545 Identity:161/545 - (29%)
Similarity:243/545 - (44%) Gaps:148/545 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GRHMRDFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLTL-------HYRSKRRGF------- 140
            |..:||.|.||:.:|            .|.|   :....|||       |:..|..||       
 Worm   505 GLFLRDILKGLEYIH------------ASAI---DFHGNLTLHNCMLDSHWIVKLSGFGVNRLLV 554

  Fly   141 VYYTMGQIREVARYFYHKEMHIELVREEIL--FDTVHVTFQLTFDNRAFTLASLAMTREEKHLPI 203
            .:.|.|||        ..|.|..:::.|.|  ||.   ..:..:.|.|        .|.|:.|  
 Worm   555 KWKTSGQI--------FTEDHTPVIKSEELHYFDP---AMKKIWKNYA--------DRNERAL-- 598

  Fly   204 SAHVLFEIFPFCMVFGADMVVRSIGNSLMVILPELLGKK--ITAWFDLVRP-----LIAFKFQTI 261
                   |.|   .||....:.|.|    |||.|::.||  :...||..|.     ||..:...|
 Worm   599 -------ITP---QFGKKCDMYSFG----VILHEIILKKKFVEQLFDSPREEDDSVLIDDENDAI 649

  Fly   262 LNRTNNIFELVTVDPVTERFDVQNEDLLQHEDGSEPEKSLRLKGQMVYMENWRMIMFLGTPVMPD 326
            .:|    |.|..:.|  |..::.| ||::                  .:||     ..|: |.||
 Worm   650 ASR----FPLPIIIP--EGIEMHN-DLIK------------------MLEN-----CFGS-VRPD 683

  Fly   327 LT---SLITTGLYINDLSMHDFSRDLML-------AGTQQSVELKLA-LDQEQQKSKKLEESMRL 380
            :.   .:|.|     .|.|.....|||:       .|..::|:.:.| |::||:|.         
 Worm   684 IALARKIIDT-----VLKMSGSLVDLMIKNLTAYTQGLNETVKNRTAELEKEQEKG--------- 734

  Fly   381 LDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIVTFTEICSRITPMEVVSM 445
                    |:||.:::||.||:.|:.| ..:|. :::::.:||:||||.||.:||:..|||||::
 Worm   735 --------DQLLMELLPKSVANDLKNG-IAVDP-KVYENATILYSDIVGFTSLCSQSQPMEVVTL 789

  Fly   446 LNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAP---DKDANHAERVCDMALDMVDAITDLKDP- 506
            |:.||..||.:..:...||:|||||||.|.||.|   :||  |.:.:|.:||...|.:...:.| 
 Worm   790 LSGMYQRFDLIISQQGGYKMETIGDAYCVAAGLPVVMEKD--HVKSICMIALLQRDCLHHFEIPH 852

  Fly   507 STGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISESTKVLIG--- 568
            ..|..|..|.|.:||.|.||::|.|.|||..||:.|..||:|||:.:..::.::.:::.|:.   
 Worm   853 RPGTFLNCRWGFNSGPVFAGVIGQKAPRYACFGEAVILASKMESSGVEDRIQMTLASQQLLEENF 917

  Fly   569 PNYKIIERGEIDVKGKGTMGTYWLE 593
            |.:....||...::|.|.:.|||||
 Worm   918 PQFVCSNRGGRTIEGIGRILTYWLE 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 22/87 (25%)
HNOBA 201..404 CDD:311573 54/220 (25%)
CYCc 383..571 CDD:214485 75/194 (39%)
Herpes_ICP4_C 794..>955 CDD:332854
daf-11NP_505960.3 Periplasmic_Binding_Protein_Type_1 <33..295 CDD:299141
PKc_like 447..695 CDD:304357 65/275 (24%)
HNOBA <714..750 CDD:285003 14/52 (27%)
CYCc 729..922 CDD:214485 78/213 (37%)
Guanylate_cyc 756..943 CDD:278633 75/190 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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