DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc88E and Gucy2e

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:XP_036012232.1 Gene:Gucy2e / 14919 MGIID:105123 Length:1139 Species:Mus musculus


Alignment Length:442 Identity:144/442 - (32%)
Similarity:221/442 - (50%) Gaps:93/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 EIFPFCMVFGADMVVRSIGNSLMVILPELLGKKITAWFDLVRPLIAFKFQTILNRTNNIFELVTV 274
            ::|...::. .::|.||...:::.:.||.:.:::.:...|.||                  ||::
Mouse   762 DVFSLAIIM-QEVVCRSTPYAMLELTPEEVIQRVRSPPPLCRP------------------LVSM 807

  Fly   275 DPV-TERFDVQNEDLLQHEDGSEPEKSLRLKGQMVYMENWRMIMFLGTPVMPDLTSLITTGLYIN 338
            |.. .|...:..:...:|     ||  ||....:.:                ||...|..|...|
Mouse   808 DQAPMECIQLMTQCWAEH-----PE--LRPSMDLTF----------------DLFKSINKGRKTN 849

  Fly   339 DLSMHDFSRDLMLAGTQQSVELKLALDQEQQKSKKLEESMR----LLDEEMRRTDELLYQMIPKQ 399
            .:       |.||.             ..:|.|..||:.:|    .|::|.::||.||.||:|..
Mouse   850 II-------DSMLR-------------MLEQYSSNLEDLIRERTEELEQEKQKTDRLLTQMLPPS 894

  Fly   400 VADRLRRGEN--PIDTCEMFDSVSILFSDIVTFTEICSRITPMEVVSMLNAMYSIFDKLTERNSV 462
            ||:.|:.|.:  |    |.|:.|::.|||||.||.|.:...|:|||.:||.:|::||.:...:.|
Mouse   895 VAEALKMGTSVEP----EYFEEVTLYFSDIVGFTTISAMSEPIEVVDLLNDLYTLFDAIIGAHDV 955

  Fly   463 YKVETIGDAYMVVAGAPDKDA-NHAERVCDMALDMVDAITDLKDPSTGQHL-----RIRVGVHSG 521
            ||||||||||||.:|.|.::. .||..:.:|:||::.|:...:    .:|:     |||:|:|||
Mouse   956 YKVETIGDAYMVASGLPQRNGQRHAAEIANMSLDILSAVGSFR----MRHMPEVPVRIRIGLHSG 1016

  Fly   522 AVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISEST-KVL--IGPNYKIIERGEIDVKG 583
            ..|||:|||.||||||||||||||||||||.:..::|::.|| ::|  :...:::..||..::||
Mouse  1017 PCVAGVVGLTMPRYCLFGDTVNTASRMESTGLPYRIHVNMSTVRILRALDQGFQMECRGRTELKG 1081

  Fly   584 KGTMGTYWLEER---ENRLP----LQLTAALQVHPLSPVPPTPTPKTKAIMP 628
            ||...||||..|   ...:|    ||..|:.....|..:||....|.:...|
Mouse  1082 KGIEDTYWLVGRLGFNKPIPKPPDLQPGASNHGISLQEIPPERRKKLEKARP 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572
HNOBA 201..404 CDD:311573 42/198 (21%)
CYCc 383..571 CDD:214485 92/198 (46%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy2eXP_036012232.1 PBP1_sensory_GC_DEF-like 58..465 CDD:380594
PK_GC-2D 570..845 CDD:270945 21/124 (17%)
HNOBA <854..899 CDD:400168 18/57 (32%)
CYCc 879..1070 CDD:214485 92/198 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.