DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc88E and Gucy2d

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001124165.1 Gene:Gucy2d / 14918 MGIID:106030 Length:1117 Species:Mus musculus


Alignment Length:548 Identity:166/548 - (30%)
Similarity:250/548 - (45%) Gaps:145/548 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLTLHYRSKRRGFVYYTMGQIREVARYFYHKE 159
            |.:.||..|| :.:|.:.|:::.:.:.:......:|.|      |:..:...          |..
Mouse   659 DLIRGLRYLH-HRRFPHGRLKSRNCVVDTRFVLKITDH------GYAEFLES----------HCS 706

  Fly   160 MHIELVREEILF---DTVHVTFQLTFDNRAFTLASL---AMTREEKHLPISAHVLFEIFPFCMVF 218
            ...:...||:|:   :.:....:.||....|:||.:   .:||:.              |:|   
Mouse   707 SRPQPAPEELLWTAPELLRGPGKATFKGDVFSLAIILQEVLTRDP--------------PYC--- 754

  Fly   219 GADMVVRSIGNSLMVILPELLGKKITAWFDLVRPLIAFKFQTILNRTNNIFELVTVDPVTERFDV 283
                   |.|.|...|:     :|:.:...|.|||::                            
Mouse   755 -------SWGLSAEEII-----RKVASPPPLCRPLVS---------------------------- 779

  Fly   284 QNEDLLQHEDGSEPEKSLRLKGQMVYMENWRMIMFLGTPVMPDLTSLITTGLYIND---LSMHDF 345
                   .:.|  |.:.::|. |:.:.|        .....|.|..:.|....||.   .|:.| 
Mouse   780 -------PDQG--PLECIQLM-QLCWEE--------APDDRPSLDQIYTQFKSINQGKKTSVVD- 825

  Fly   346 SRDLMLAGTQQSVELKLALDQEQQKSKKLEESMRLLDEEMRRTDELLYQMIPKQVADRLRRGE-- 408
            |...||....:|:|     |..|:::::||       .|.|:|:.||.||:|..||..|:.|.  
Mouse   826 SMLRMLEKYSESLE-----DLVQERTEELE-------LERRKTERLLSQMLPPSVAHALKMGTTV 878

  Fly   409 NPIDTCEMFDSVSILFSDIVTFTEICSRITPMEVVSMLNAMYSIFDKLTERNSVYKVETIGDAYM 473
            .|    |.||.|:|.|||||.||.|.:...|:|||..||.:|::||.:.:.:.||||||||||||
Mouse   879 EP----EYFDQVTIYFSDIVGFTTISALSEPIEVVGFLNDLYTLFDAVLDSHDVYKVETIGDAYM 939

  Fly   474 VVAGAPDKDAN-HAERVCDMALDMVDAITDLKDPSTGQH-----LRIRVGVHSGAVVAGIVGLKM 532
            |.:|.|.::.| ||..:.::|||::....:.:    .:|     :|:|.|:|||..|||:|||.|
Mouse   940 VASGLPRRNGNRHAAEIANLALDILSYAGNFR----MRHAPDVPIRVRAGLHSGPCVAGVVGLTM 1000

  Fly   533 PRYCLFGDTVNTASRMESTSIAMKVHISEST---KVLIGPNYKIIERGEIDVKGKGTMGTYWLEE 594
            |||||||||||||||||||.:..::|:|:||   .:.:...|||..||:.::||||...||||..
Mouse  1001 PRYCLFGDTVNTASRMESTGLPYRIHVSQSTVQALLSLDEGYKIDVRGQTELKGKGLEETYWLTG 1065

  Fly   595 RE---NRLPLQLTAALQVHPLSPVPPTP 619
            :.   ..||.         |||..|..|
Mouse  1066 KVGFCRPLPT---------PLSIKPGDP 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 11/68 (16%)
HNOBA 201..404 CDD:311573 42/205 (20%)
CYCc 383..571 CDD:214485 93/198 (47%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy2dNP_001124165.1 PBP1_sensory_GC_DEF-like 71..445 CDD:380594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 529..557
PK_GC-2D 554..818 CDD:270945 42/250 (17%)
CYCc 855..1044 CDD:214485 92/196 (47%)
Interaction with NCALD. /evidence=ECO:0000250|UniProtKB:P51839 874..915 21/44 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1096..1117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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