DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc88E and Gucy2c

DIOPT Version :9

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001120790.1 Gene:Gucy2c / 14917 MGIID:106903 Length:1072 Species:Mus musculus


Alignment Length:643 Identity:193/643 - (30%)
Similarity:283/643 - (44%) Gaps:136/643 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEKWEDIRRQAGIDSPSFSVHQVYPENLLQKLAKKAQQV-LGVSE---RDFMDQMGVYFVGFVGQ 79
            ::||..|        ||        ||:......:...: |.:.:   ||.:.:        |.|
Mouse   465 QKKWSHI--------PS--------ENIFPLETNETNHISLKIDDDRRRDTIQR--------VRQ 505

  Fly    80 YGYDRVLSVLGRHMRDFLNGLDNLHEYLKFSYPRMRAPSFICENETKQGLTLHYRSKRRGFV-YY 143
            ..||:...:|    :|..:...|..|..|....::....:.  |.||...|:...::..|.| |.
Mouse   506 CKYDKKKVIL----KDLKHSDGNFSEKQKIDLNKLLQSDYY--NLTKFYGTVKLDTRIFGVVEYC 564

  Fly   144 TMGQIREVARYFYHKEMHIELVREEILFDTVHV---TFQLTFDNRAFTLASLAMTREEKH-LPIS 204
            ..|.:|||                  |.||:..   || :.::.:...|..:|......| ..|.
Mouse   565 ERGSLREV------------------LNDTISYPDGTF-MDWEFKISVLNDIAKGMSYLHSSKIE 610

  Fly   205 AHVLFEIFPFCMVFGADMVVRSIGNSLMVILPELLGKK--ITAWFDLVRPLIAFK---------F 258
            .|...: ...|:| .:.|||:........|||.   ||  .||...|.:..|:.|         .
Mouse   611 VHGRLK-STNCVV-DSRMVVKITDFGCNSILPP---KKDLWTAPEHLRQATISQKGDVYSFAIIA 670

  Fly   259 QTILNRTNNIFELVTVDPVTERFDVQNE-------DL-LQHEDGSEPEKSLRLKGQMVYMENWRM 315
            |.|:.|....:.|...|...:.|.|:|.       || |:..|..|.|..|.:|      ..|..
Mouse   671 QEIILRKETFYTLSCRDHNEKIFRVENSYGKPFRPDLFLETADEKELEVYLLVK------SCWEE 729

  Fly   316 IMFLGTPVMPDLTSLITT-----GLYINDLSMHDFSRDLMLAGTQQSVELKLALDQEQQKSKKLE 375
                .....||...:.:|     ||:      ||...:..:....:.::|     ..:.....:|
Mouse   730 ----DPEKRPDFKKIESTLAKIFGLF------HDQKNESYMDTLIRRLQL-----YSRNLEHLVE 779

  Fly   376 ESMRLLDEEMRRTDELLYQMIPKQVADRLRRGENPIDTCEMFDSVSILFSDIVTFTEICSRITPM 440
            |..:|...|..|.|.|.:.::|:.|...|:  |..|...|:::.|:|.|||||.||.||...|||
Mouse   780 ERTQLYKAERDRADHLNFMLLPRLVVKSLK--EKGIVEPELYEEVTIYFSDIVGFTTICKYSTPM 842

  Fly   441 EVVSMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDAN-HAERVCDMALDMVDAITDLK 504
            |||.|||.:|..||::.:.:.|||||||||||:|.:|.|.::.| ||..:..||||::..|...:
Mouse   843 EVVDMLNDIYKSFDQIVDHHDVYKVETIGDAYVVASGLPMRNGNRHAVDISKMALDILSFIGTFE 907

  Fly   505 -DPSTGQHLRIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMESTSIAMKVHISESTKVLIG 568
             :...|..:.||:|||||...||:||:|||||||||||||||||||||.:.:::|:|.||..::.
Mouse   908 LEHLPGLPVWIRIGVHSGPCAAGVVGIKMPRYCLFGDTVNTASRMESTGLPLRIHMSSSTITILK 972

  Fly   569 PN-----YKIIERGEIDVKGKGTMGTYWL---EERENRLPLQLTAALQVHPLSPVPPT 618
            ..     |::  |||..:||:||..||||   :::|..|              |.|||
Mouse   973 RTDCQFLYEV--RGETYLKGRGTETTYWLTGMKDQEYNL--------------PSPPT 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572 30/149 (20%)
HNOBA 201..404 CDD:311573 51/226 (23%)
CYCc 383..571 CDD:214485 92/194 (47%)
Herpes_ICP4_C 794..>955 CDD:332854
Gucy2cNP_001120790.1 Periplasmic_Binding_Protein_Type_1 35..415 CDD:299141
PKc_like 480..749 CDD:304357 68/316 (22%)
STYKc 502..744 CDD:214568 64/289 (22%)
CYCc 787..978 CDD:214485 92/192 (48%)
Guanylate_cyc 814..1001 CDD:278633 95/188 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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