DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc88E and gc2

DIOPT Version :10

Sequence 1:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster
Sequence 2:XP_021333059.1 Gene:gc2 / 140425 ZFINID:ZDB-GENE-011128-8 Length:1120 Species:Danio rerio


Alignment Length:265 Identity:117/265 - (44%)
Similarity:161/265 - (60%) Gaps:34/265 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 QQKSKKLEESMRLLDEEM----RRTDELLYQMIPKQVADRLRRGE--NPIDTCEMFDSVSILFSD 426
            :|.|..|||.:|...||:    ::|::||.||:|..||:.|:.|.  .|    |.|:|||:.|||
Zfish   829 EQYSSNLEELIRERTEELEIEKQKTEKLLTQMLPPSVAEALKLGTTVEP----EHFESVSLYFSD 889

  Fly   427 IVTFTEICSRITPMEVVSMLNAMYSIFDKLTERNSVYKVETIGDAYMVVAGAPDKDAN-HAERVC 490
            ||.||.|.:...|:|||.:||.:|:.||.:...:.|||||||||||||.:|.|..:.| ||..:.
Zfish   890 IVGFTTISANSEPIEVVDLLNDLYTTFDAVIGNHDVYKVETIGDAYMVASGVPVPNGNRHAAEIA 954

  Fly   491 DMALDMVDAITDLKDPSTGQHL-----RIRVGVHSGAVVAGIVGLKMPRYCLFGDTVNTASRMES 550
            :||||::.|:...:    .:|:     |||:|:|:|..|||:|||.|||||||||||.|||||||
Zfish   955 NMALDILSAVGTFR----MRHMPDVPVRIRIGLHTGPCVAGVVGLTMPRYCLFGDTVTTASRMES 1015

  Fly   551 TSIAMKVHISEST-KVL--IGPNYKIIERGEIDVKGKGTMGTYWLEERENRLPLQLTAALQVHPL 612
            |.:..::|:..|| |:|  :...|::..|...::|||....||||..|:.          ...||
Zfish  1016 TGLPYRIHVHSSTVKILMELKLGYRVELRARTELKGKRIEETYWLTGRDG----------FTKPL 1070

  Fly   613 SPVPP 617
             ||||
Zfish  1071 -PVPP 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc88ENP_001036711.1 HNOB 2..163 CDD:462233
HNOBA 201..404 CDD:462234 16/39 (41%)
CYCc 383..571 CDD:214485 95/202 (47%)
PHA03307 794..>955 CDD:223039
gc2XP_021333059.1 PBP1_sensory_GC_DEF-like 59..440 CDD:380594
PK_GC-2D 551..815 CDD:270945
HNOBA <824..869 CDD:462234 16/39 (41%)
CYCc 848..1040 CDD:214485 93/199 (47%)
Blue background indicates that the domain is not in the aligned region.

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