DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyS and Alg11

DIOPT Version :9

Sequence 1:NP_731967.2 Gene:GlyS / 41823 FlyBaseID:FBgn0266064 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_001101871.1 Gene:Alg11 / 361174 RGDID:1564725 Length:492 Species:Rattus norvegicus


Alignment Length:227 Identity:47/227 - (20%)
Similarity:82/227 - (36%) Gaps:73/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 TNPLFGIDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNL--------SGF--GCFME 570
            |.|||     ::|.||.:|.:..|                |:::|::        .||  ..|:.
  Rat   181 TLPLF-----KYVGGCRVGSYVHY----------------PTISTDMLSVVKNQNPGFNNAAFIS 224

  Fly   571 EHISDPKSYGIYIVDRRYIGLENSVQQLSSFMMEFSRLNRRQRIIQRNRTERLSDLLD-WRT--- 631
            .:....|:..||.    |:           |...:..:.....|:..|.:..|:.:|. |:.   
  Rat   225 RNALLSKAKLIYY----YL-----------FAFVYGLVGSCSDIVMVNSSWTLNHILSLWKVGHC 274

  Fly   632 LGIYYRQARVKAL-------QAVYPDYVDELSLYG----SKNNLI----FSRPHSEPPSPTSSRH 681
            ..|.|....|:..       :.|.|.::  |...|    .||:.:    |::..:|  ....|||
  Rat   275 TNIVYPPCDVQTFLDIPLHEKKVTPGHL--LVSIGQFRPEKNHALQIKAFAKLLNE--KAAESRH 335

  Fly   682 TTPAPSVHG---SDDEDSVDEETELKE-LGIK 709
            :.....:.|   .|||..|::...|.| ||::
  Rat   336 SLKLVLIGGCRNKDDEFRVNQLRRLSENLGVQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlySNP_731967.2 Glycogen_syn 53..697 CDD:399009 42/212 (20%)
Alg11NP_001101871.1 PLN02949 20..492 CDD:215511 47/227 (21%)
GT1_ALG11_like 63..480 CDD:99978 47/227 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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