DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyS and Alg1

DIOPT Version :9

Sequence 1:NP_731967.2 Gene:GlyS / 41823 FlyBaseID:FBgn0266064 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_036015739.1 Gene:Alg1 / 208211 MGIID:2384774 Length:536 Species:Mus musculus


Alignment Length:280 Identity:54/280 - (19%)
Similarity:94/280 - (33%) Gaps:100/280 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 NDPVLSSIRRCHLFNS-------------------RHDRVKMVFHPEFLTSTNPLFGIDYEEFVR 529
            :.|..|.:.||.|.:.                   ::||:::|    .||.            :|
Mouse    98 SSPACSGLDRCFLVSGSSGRQSPFTIHSKPRDELLQNDRIRIV----KLTD------------LR 146

  Fly   530 GCHLG----------VFPSYYEPW---GYTPAECTVM----GIPSVTTNLSGF-GCFM-EEHISD 575
            |...|          ||.:.|..|   ...||....:    |:|::.  :..| ||.. .:.:.|
Mouse   147 GLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFLQNPPGLPAIA--VCWFVGCICGSKLVID 209

  Fly   576 PKSYGIYIVDRRYIGLENSVQQLSSFMME-FSRLNRRQRIIQRNRTERLSDLLDW--RTLGIYYR 637
            ..:||..|:...: |..:.:..|:.:..: |.||:.....:.....|.|::  :|  |.:.:|.:
Mouse   210 WHNYGYSIMGLVH-GPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDLAE--NWCVRAVTLYDK 271

  Fly   638 QARVKALQAVYPDYVDELSLYGSKNNLIFSRPH--------SEPPSPTSSR-------------- 680
            .|          .:..|..| ..::.|.....|        |:|..|.:.|              
Mouse   272 PA----------SFFKETPL-DLQHELFMKLSHTYSPFQSCSDPSHPDTERSAFTERDCQSGVVR 325

  Fly   681 --HTTPA---PSVHGSDDED 695
              |..||   .|...::|||
Mouse   326 RLHGRPALLVSSTSWTEDED 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlySNP_731967.2 Glycogen_syn 53..697 CDD:399009 54/280 (19%)
Alg1XP_036015739.1 GT33_ALG1-like 33..515 CDD:340843 54/280 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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