DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyS and algn-11

DIOPT Version :9

Sequence 1:NP_731967.2 Gene:GlyS / 41823 FlyBaseID:FBgn0266064 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_498606.1 Gene:algn-11 / 176032 WormBaseID:WBGene00015162 Length:470 Species:Caenorhabditis elegans


Alignment Length:168 Identity:32/168 - (19%)
Similarity:62/168 - (36%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 IYTVIRSKAYVSTEEMGEQLC------------MMGPYKEHCARTEMEEMEFPRGNPLLDAVNSL 117
            :|.....:|:::.|.:.|.|.            .:.|.|.|..:.|:          |.|....|
 Worm   255 VYPPCDVEAFLNIESVAESLLEDTKTVRLLSVGQIRPEKNHKLQLEV----------LHDVKEPL 309

  Fly   118 RSRGYKIH---TGRWLVDGNPQLILFDIGSAAWKLDQFKSEMWEKCHIGIPHLD--IETNDAII- 176
            ...||.:.   .|....:.:.:.:.. :.:.|.|||..:..:|:   :.:|:.|  :|.:.|:| 
 Worm   310 EKMGYNVELCIAGGCRNEEDQERVKM-LKNEAEKLDISEQLIWQ---LNVPYEDLVVELSKALIS 370

  Fly   177 --------LGFMIAEFLEEFRNFAVTYSQNNELSAPRI 206
                    .|..:.|.:.     |.|...:|:...||:
 Worm   371 IHTMHNEHFGISVVEAMA-----ASTIILSNDSGGPRM 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlySNP_731967.2 Glycogen_syn 53..697 CDD:399009 32/168 (19%)
algn-11NP_498606.1 PLN02949 8..458 CDD:215511 32/168 (19%)
GT1_ALG11_like 41..461 CDD:99978 32/168 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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