DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6966 and AT4G05040

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001031584.1 Gene:AT4G05040 / 825846 AraportID:AT4G05040 Length:572 Species:Arabidopsis thaliana


Alignment Length:468 Identity:93/468 - (19%)
Similarity:154/468 - (32%) Gaps:164/468 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GATPLVISCRNGHYDIVEYLLTKCRANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLV-- 103
            |.:.|.::.|.||.::|:.::::|...|.::.        .:|..||..||.|||..||:.||  
plant   115 GDSVLHLAARWGHLELVKNIISECPCLVLELN--------FKDQLPLHVAAHAGHSAIVEALVAS 171

  Fly   104 ------------RRGAN----------------------------VN------------------ 110
                        |...|                            ||                  
plant   172 VTFFSDRLAEEDRERLNPYVLRDKYGNTALHLAIEGRYMEMAASLVNENQNASFLENNEGISSLY 236

  Fly   111 ---------------STTRTNSTPLRAACFDGHYEIVKYLVHHGADFE-------VANRH----- 148
                           .|...|....|.:..|...|..|:|||...:..       :.|.:     
plant   237 MAVEAGDVTLVKEILKTAGNNDLEGRNSNLDSKLEGRKHLVHVALNARSIGVLDVILNEYPSLED 301

  Fly   149 -----GHTCLMIAC----YKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGSLQILQLLLK- 203
                 |.|||..|.    |||   :...|.....:|..|...|:..:|..||:|.::|::.:|| 
plant   302 ERDEEGRTCLSFAASIGFYKG---VCNLLDRSTKNVYVCDEDGSFPIHTAAENGHIRIVKEILKR 363

  Fly   204 --HGATMDVDYYGMTPLLAASVTGHMPIVEHLITLPCVSRESRIHALELLGATY-VDRKRDMAAA 265
              |...| ::..|...|..|:..|...:|:.|:         |....:.||... ||....:..|
plant   364 CPHSKHM-LNKLGQNVLHIAAKIGEHNLVKSLM---------RSDDTKHLGVGQDVDGNTPLHLA 418

  Fly   266 LNLWRRALEERAVEPPLEKKVQEPVPAYEMVREVTSVEELEEMVLDPDEMRMQALVIRQRILGPT 330
            :..||                      |..:|.:.|..::.::   .::..:.|..|.:.:|.|.
plant   419 VLNWR----------------------YRSIRTLASDVKILQL---RNDNGLTARGIAESVLKPN 458

  Fly   331 HPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQ-------SSLLSFAELFS 388
            :   .::.|...|...||..|..|..:        :.:.:|..|:..       ::||..|.|.:
plant   459 Y---IFHERLTLAFLLDAHAFRGCGSV--------KSLTKPSEPLDHEKSRDYVNTLLLVAALVA 512

  Fly   389 FMLVEAGRLLPRG 401
            .|...||..:|.|
plant   513 TMTFAAGFTIPGG 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 24/145 (17%)
ANK 40..169 CDD:238125 42/223 (19%)
ANK repeat 40..72 CDD:293786 8/30 (27%)
ANK repeat 86..113 CDD:293786 15/101 (15%)
Ank_2 87..177 CDD:289560 34/185 (18%)
ANK 110..234 CDD:238125 37/180 (21%)
ANK repeat 118..146 CDD:293786 7/34 (21%)
ANK repeat 148..179 CDD:293786 10/44 (23%)
ANK repeat 181..210 CDD:293786 10/31 (32%)
Ank_4 182..234 CDD:290365 15/54 (28%)
ANK 528..>612 CDD:238125
ANK repeat 529..573 CDD:293786
ANK repeat 575..607 CDD:293786
AT4G05040NP_001031584.1 ANK 111..251 CDD:238125 24/143 (17%)
ANK repeat 114..146 CDD:293786 8/30 (27%)
Ank_2 119..222 CDD:289560 23/110 (21%)
ANK repeat 148..194 CDD:293786 14/45 (31%)
ANKYR 176..394 CDD:223738 40/221 (18%)
ANK 301..421 CDD:238125 33/132 (25%)
ANK repeat 306..338 CDD:293786 10/34 (29%)
ANK repeat 340..372 CDD:293786 10/32 (31%)
ANK repeat 374..408 CDD:293786 9/42 (21%)
Ank_2 379..>447 CDD:289560 16/101 (16%)
PGG 495..>571 CDD:290670 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.