DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6966 and fem1c

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_937788.2 Gene:fem1c / 378965 ZFINID:ZDB-GENE-031008-3 Length:618 Species:Danio rerio


Alignment Length:668 Identity:339/668 - (50%)
Similarity:429/668 - (64%) Gaps:55/668 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYKFIVFNAARDNNLAQLKATLYNKSSVEVGSLISAKVNGATPLVISCRNGHYDIVEYLLTKCR 65
            ||.|..|||||||..|..|:..|.|||..||..|::.|.||||||:::.|.||.::||:|:..|.
Zfish     1 MDLKTAVFNAARDGKLKLLQKLLENKSDREVLKLMAEKTNGATPLLMASRYGHLELVEFLMECCC 65

  Fly    66 ANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRRGANVNSTTRTNSTPLRAACFDGHYE 130
            |.||..|||:||||.||.|||||.|:|||||.:|:.|:..||:||:||.||||||||||||||.:
Zfish    66 APVELGGSVNFDGEVIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPLRAACFDGHLD 130

  Fly   131 IVKYLVHHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGSL 195
            ||:|||.|.||.|||||||||||||:|||||..|||:||...|||||.|||||||||||||||||
Zfish   131 IVRYLVEHQADLEVANRHGHTCLMISCYKGHREIAQFLLEKGADVNRRSVKGNTALHDCAESGSL 195

  Fly   196 QILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLITLPCVSRESRIHALELLGATYVDRKR 260
            :|:::|||.||:|:.|.|||||||:||||||..||:.|...|......||.||||||||:||:||
Zfish   196 EIMKMLLKFGASMEKDGYGMTPLLSASVTGHTNIVDFLTAHPQTGLAERISALELLGATFVDKKR 260

  Fly   261 DMAAALNLWRRALEERAVEPPLEKKVQ--EPVPAYEMVREVTSVEELEEMVLDPDEMRMQALVIR 323
            |:..||..|:||:|.|..|....::.:  ||.|||:..|||::.|||:.::.|||:||||||:||
Zfish   261 DLLGALQYWKRAMELRHSEADCMRREEPLEPEPAYDCSREVSTAEELDGLIADPDDMRMQALLIR 325

  Fly   324 QRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSLLSFAELFS 388
            :|||||.|||||||||:|||.|||:|.|:|||.||.|||.|||..|:||||||.|||||||||||
Zfish   326 ERILGPAHPDTSYYIRYRGAVYADSGNFERCIRLWKYALDMQQSNLEPLSPMTASSLLSFAELFS 390

  Fly   389 FMLVEAGR-LLPRGRVVPPIEPDSMLTIFYKAVKEVERGLAFTLEQQKDQQHPQKQLPAADKSPS 452
            |||.:..: ||..|     :....::.|..::|.|:||.:              || |.....| 
Zfish   391 FMLQDRAKGLLGAG-----VSFQQLMEILCRSVLEIERAV--------------KQ-PRPSPDP- 434

  Fly   453 CSASSSASSSSSTTLLSAHQHDCNHDPNALSRTMISAIHIGCLLSSLLDTDALSPEMRRQVMGAL 517
                                     ||..||:.:...:|:.|||..|    ..|||..:.....:
Zfish   435 -------------------------DPAQLSKLLSIILHLICLLEKL----PCSPEQDQHKKETI 470

  Fly   518 YRLNRLKVRVRFDRTALHYACYREGTLAGRYPSCQFPSVTLAKALLEVGADPNAIDEAGNTPLHL 582
            ||..:|:...|...:.||.|.....|..||||.|:|||:.:|..|||.|||.|:.|...|:|||:
Zfish   471 YRFLKLQACGRNGFSPLHLAVDHNTTCVGRYPVCKFPSLQVASVLLECGADVNSRDLDDNSPLHV 535

  Fly   583 ATMQPYVEPLSHILLEGGAHLDTKNYAGETFESLLAPTPMHK-IIDPMKYTTLACLAARTIKKHD 646
            |....:.: :..:|:.||.|.|:.|...:|...||..|.:.| :|.|:.:|||.|||||.|.:|.
Zfish   536 AASNNHPD-IMKLLISGGTHFDSTNALQQTACDLLDHTQLAKSLIQPINHTTLQCLAARAIIRHR 599

  Fly   647 IRYEGTVPATLYEFIELH 664
            :.|.|::|..|..|:.||
Zfish   600 LVYRGSIPERLEAFVLLH 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 56/101 (55%)
ANK 40..169 CDD:238125 87/128 (68%)
ANK repeat 40..72 CDD:293786 16/31 (52%)
ANK repeat 86..113 CDD:293786 15/26 (58%)
Ank_2 87..177 CDD:289560 64/89 (72%)
ANK 110..234 CDD:238125 93/123 (76%)
ANK repeat 118..146 CDD:293786 21/27 (78%)
ANK repeat 148..179 CDD:293786 23/30 (77%)
ANK repeat 181..210 CDD:293786 22/28 (79%)
Ank_4 182..234 CDD:290365 37/51 (73%)
ANK 528..>612 CDD:238125 33/83 (40%)
ANK repeat 529..573 CDD:293786 20/43 (47%)
ANK repeat 575..607 CDD:293786 10/31 (32%)
fem1cNP_937788.2 Ank_2 <2..62 CDD:289560 31/59 (53%)
ANK 1 2..31 15/28 (54%)
Ank_2 <40..112 CDD:289560 42/71 (59%)
ANK repeat 40..75 CDD:293786 18/34 (53%)
ANK 2 40..70 15/29 (52%)
ANK 82..202 CDD:238125 88/119 (74%)
ANK repeat 82..113 CDD:293786 18/30 (60%)
ANK 3 82..111 17/28 (61%)
Ank_2 87..178 CDD:289560 65/90 (72%)
ANK 4 115..144 22/28 (79%)
ANK repeat 118..146 CDD:293786 21/27 (78%)
ANK repeat 148..179 CDD:293786 23/30 (77%)
ANK 5 148..177 21/28 (75%)
ANK 176..>236 CDD:238125 43/59 (73%)
ANK 6 181..210 22/28 (79%)
ANK repeat 181..209 CDD:293786 21/27 (78%)
Ank_4 182..233 CDD:290365 37/50 (74%)
ANK 7 213..243 17/29 (59%)
TPR 1 245..279 21/33 (64%)
TPR 2 337..370 24/32 (75%)
ANK 481..>580 CDD:238125 38/99 (38%)
ANK repeat 482..526 CDD:293786 20/43 (47%)
ANK 8 482..524 19/41 (46%)
Ank_4 483..549 CDD:290365 26/66 (39%)
ANK 9 528..557 9/29 (31%)
ANK repeat 528..552 CDD:293786 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 218 1.000 Domainoid score I2597
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10606
Inparanoid 1 1.050 604 1.000 Inparanoid score I899
OMA 1 1.010 - - QHG48454
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 1 1.000 - - FOG0003207
OrthoInspector 1 1.000 - - otm26324
orthoMCL 1 0.900 - - OOG6_105900
Panther 1 1.100 - - O PTHR24173
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4568
SonicParanoid 1 1.000 - - X856
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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