DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6966 and Fem-1

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_611508.1 Gene:Fem-1 / 37344 FlyBaseID:FBgn0034542 Length:702 Species:Drosophila melanogaster


Alignment Length:693 Identity:219/693 - (31%)
Similarity:335/693 - (48%) Gaps:98/693 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NNLAQLKATLYNKSSVEVGSLISAK------VN---------GATPLVISCRNGHYDIVEYLLTK 63
            |||.....:....|.||:.:.:|.:      ||         ..|||.::...|:...|:.||:.
  Fly    59 NNLHLAARSGQMLSFVEILNSVSCRAVQTHLVNTNFDQPDGQSLTPLTMAAMMGNVKFVKTLLSH 123

  Fly    64 CRANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRRGANVNSTTRTNSTPLRAACFDGH 128
            ...::::..:|.:||..:..|..||.||..|||.||||||:.||.:|..|:..|:||||||::|.
  Fly   124 YDVDLDRECNVIYDGMVVYGATALWVAAGMGHLQIVKMLVQAGAAINHNTKAQSSPLRAACYEGR 188

  Fly   129 YEIVKYLVHHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESG 193
            .:||::|:.:|||....|...:..||||.||||..:.:.||...:..|..::.|.||||..||||
  Fly   189 LDIVEFLIDNGADVNATNLFNNNTLMIAAYKGHHLVVKTLLQNGSRANDQALCGATALHYAAESG 253

  Fly   194 SLQILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLITLP-CVSRESRIHALELLGATYVD 257
            .|.::..||.||||:..:..|:||.|.|:...|..::|..|..| .:|.|.:|.|||||||||.:
  Fly   254 HLDVVVALLDHGATLKKNELGITPALQAAERLHEDVLEAFIERPELMSLEEQITALELLGATYAN 318

  Fly   258 R--KRDMAAALNLWRRALEERAVEP--PLEKKVQEPVPAYEMVREVTSVEELEEMVLDPDEMRMQ 318
            .  |.|:..|.....||::.|...|  .:.|:||..||||:...|..::.||..:.|:...:.|:
  Fly   319 DKIKYDVNKAYGYLLRAMQLRYSNPRGVIRKRVQPTVPAYDNWLETENLPELYAIKLNHHSIHME 383

  Fly   319 ALVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSLLSF 383
            :|.||:||||..:|:....|.:|||..||.|||.:|..||:||:.::.:    .:......||.|
  Fly   384 SLAIRERILGRNNPELPQAIIYRGAVMADQGRFYQCQVLWNYAIDLRMR----NNVSVDRDLLRF 444

  Fly   384 AELFSFML-VEAGRLLPRGRVVPPIEPDSMLTIFYKAVKEVERGLAFTLEQQKDQQHPQKQLPAA 447
            |:||:.:| ||...|          ..|.:|.:..|..:|:|.. .|.:::.|....|  .|...
  Fly   445 AQLFAQILRVENHNL----------TLDHVLPVLAKCQQEIENN-KFKIKEAKPNACP--SLWQD 496

  Fly   448 DKSPSCSASSSASSSSSTTLLSAHQHDCNHDPNALSRTMISAIHIGCLLSSLLDTDALSPEMRRQ 512
            ..:.:|  .::.......|.|:..:.|.|.|...:.:..:       ::...:..|         
  Fly   497 QNNQNC--ITALYLIKIVTHLARRKKDQNIDEEHIQQLFL-------VVRKFIQND--------- 543

  Fly   513 VMGALYRLNRLKVRVRFDRTALHYACYREGTLAGRYP--------SCQFPSVTLAKALLEVGADP 569
                        .|::..:|.||.|      :.|..|        .|:||....|..|:..||..
  Fly   544 ------------TRLQDGQTLLHIA------VNGVMPVDEFYTNEMCRFPCYATALVLVHCGASV 590

  Fly   570 NAIDEAGNTPLHLA-----TMQPYVEPLSHIL---LEGGAHLDTKNYAGETFES-----LLAPTP 621
            .|:|...|||||:.     |.|.....::.||   :|.|||||..|.||:|..:     :|| ..
  Fly   591 VAVDSDRNTPLHILVTKVNTTQDRQAEMARILELFVEAGAHLDAVNAAGQTAATACKLPILA-NR 654

  Fly   622 MHKIIDPMKYTTLACLAARTIKKHDIRYEGTVPATLYEFIELH 664
            :|  .....:|:|.|||||:|..:.:.::|.:|..|..||::|
  Fly   655 LH--AHQNAHTSLKCLAARSIATNRLNFKGLIPTQLEAFIQMH 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 36/112 (32%)
ANK 40..169 CDD:238125 52/137 (38%)
ANK repeat 40..72 CDD:293786 8/40 (20%)
ANK repeat 86..113 CDD:293786 16/26 (62%)
Ank_2 87..177 CDD:289560 42/89 (47%)
ANK 110..234 CDD:238125 51/123 (41%)
ANK repeat 118..146 CDD:293786 13/27 (48%)
ANK repeat 148..179 CDD:293786 11/30 (37%)
ANK repeat 181..210 CDD:293786 16/28 (57%)
Ank_4 182..234 CDD:290365 23/51 (45%)
ANK 528..>612 CDD:238125 33/99 (33%)
ANK repeat 529..573 CDD:293786 14/51 (27%)
ANK repeat 575..607 CDD:293786 15/39 (38%)
Fem-1NP_611508.1 ANK 61..196 CDD:238125 45/134 (34%)
ANK repeat 103..129 CDD:293786 7/25 (28%)
Ank_2 105..206 CDD:289560 40/100 (40%)
ANK 142..262 CDD:238125 54/119 (45%)
ANK repeat 142..173 CDD:293786 17/30 (57%)
ANK repeat 178..206 CDD:293786 13/27 (48%)
Ank_2 180..266 CDD:289560 37/85 (44%)
ANK repeat 208..239 CDD:293786 11/30 (37%)
ANK repeat 241..266 CDD:293786 13/24 (54%)
Ank_4 244..294 CDD:290365 22/49 (45%)
ANK 548..685 CDD:238125 46/145 (32%)
ANK repeat 548..594 CDD:293786 14/51 (27%)
ANK repeat 596..636 CDD:293786 15/39 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469050
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0508
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24173
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X856
76.900

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