DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6966 and Fem1a

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001020877.1 Gene:Fem1a / 316131 RGDID:1561112 Length:654 Species:Rattus norvegicus


Alignment Length:711 Identity:336/711 - (47%)
Similarity:413/711 - (58%) Gaps:104/711 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYKFIVFNAARDNNLAQLKATLYNKSSVEVGSLISAKVNGATPLVISCRNGHYDIVEYLLTKCR 65
            ||....|:|||.|..|..|:..|..:...|:..|:.....|.|||:|:.|.||.|:||||:..|.
  Rat     1 MDLHTAVYNAAHDGKLLLLQKLLAGRGREEIEELLGEVAGGGTPLLIAARRGHLDVVEYLVDNCG 65

  Fly    66 ANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRRGANVNSTTRTNSTPLRAACFDGHYE 130
            |:||..|||.||||.||.|||||.|:|||||.:|:.|:||||:||.|||||||||||||||||.:
  Rat    66 ASVEASGSVHFDGETIEGAPPLWAASAAGHLAVVRSLLRRGASVNRTTRTNSTPLRAACFDGHLD 130

  Fly   131 IVKYLV-HHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGS 194
            :|:||| .|.||.|||||||||||||:|||||..||:|||...|.|||.|.||||||||||||||
  Rat   131 VVRYLVGEHKADLEVANRHGHTCLMISCYKGHREIARYLLERGAQVNRRSAKGNTALHDCAESGS 195

  Fly   195 LQILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLI------------TLP---------- 237
            |:||||||...|.|:.|.||||||||||||||..|||:||            .||          
  Rat   196 LEILQLLLGCHARMERDGYGMTPLLAASVTGHTNIVEYLIQEQPGHGQLSGTELPGEGSSQMAGN 260

  Fly   238 --------------C-VSRESRIHALELLGATYVDRKRDMAAALNLWRRALEER--------AVE 279
                          | .|||:.:.|||||||||||:|||:..||..||||:|.|        ..|
  Rat   261 HCSTPEEAEPYESCCPTSREAAVEALELLGATYVDKKRDLLGALKHWRRAMELRHQGGDYLPKPE 325

  Fly   280 PPLEKKVQEPVPAYEMVREVTSVEELEEMVLDPDEMRMQALVIRQRILGPTHPDTSYYIRFRGAH 344
            |      |:.|.||:..|||::.:|||.::.||||||||||:||:|||||:|||||||||:|||.
  Rat   326 P------QQLVLAYDYSREVSTPQELEALITDPDEMRMQALLIRERILGPSHPDTSYYIRYRGAV 384

  Fly   345 YADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSLLSFAELFSFMLVEAGRLLPRGRVVPPIEP 409
            |||:|.|:|||.||.|||.|||..|:||||||.||.||||||||::|.:..   .:|.:...:..
  Rat   385 YADSGNFERCIRLWKYALDMQQNNLEPLSPMTASSFLSFAELFSYVLQDRS---AKGNLGMQLGF 446

  Fly   410 DSMLTIFYKAVKEVERGLAFTLEQQKDQQHPQKQLPAADKSPSCSASSSASSSSSTTLLSAHQHD 474
            ..::.:..|.|:||||.|               |||   |.|..||.                  
  Rat   447 ADLMGVLSKGVREVERAL---------------QLP---KEPGDSAQ------------------ 475

  Fly   475 CNHDPNALSRTMISAIHIGCLLSSLLDTDALSPEMRRQVMGALYRLNRLKVRVRFDRTALHYACY 539
                       ...||.|...|..||:....:|.........:|||.:...|.:...|.||.|..
  Rat   476 -----------FTKAIAIILHLLYLLEKVECTPSQEHLKHQTVYRLLKCAPRGKNGFTPLHMAVD 529

  Fly   540 REGTLAGRYPSCQFPSVTLAKALLEVGADPNAIDEAGNTPLHLATMQPYVEPLSHILLEGGAHLD 604
            :|.|..|||....|||:.:.|.||:.||||::.|...|||||:|. |.....:...|:|.|||:|
  Rat   530 KETTNVGRYRVGIFPSLQVVKVLLDCGADPDSRDFDNNTPLHVAA-QNNCPAIMDALIEAGAHMD 593

  Fly   605 TKNYAGETFESLLAPTPMHK-IIDPMKYTTLACLAARTIKKHDIRYEGTVPATLYEFIELH 664
            ..|...:|...||....:.| .:.|..|.||.|||||.:.::.:.|:|.:|..|..||:||
  Rat   594 ATNAFKKTAYELLDSKLLAKSTMQPFNYVTLQCLAARALDRNKVPYKGFIPEELEAFIQLH 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 53/101 (52%)
ANK 40..169 CDD:238125 90/129 (70%)
ANK repeat 40..72 CDD:293786 17/31 (55%)
ANK repeat 86..113 CDD:293786 17/26 (65%)
Ank_2 87..177 CDD:289560 65/90 (72%)
ANK 110..234 CDD:238125 94/124 (76%)
ANK repeat 118..146 CDD:293786 20/28 (71%)
ANK repeat 148..179 CDD:293786 22/30 (73%)
ANK repeat 181..210 CDD:293786 23/28 (82%)
Ank_4 182..234 CDD:290365 40/51 (78%)
ANK 528..>612 CDD:238125 34/83 (41%)
ANK repeat 529..573 CDD:293786 19/43 (44%)
ANK repeat 575..607 CDD:293786 13/31 (42%)
Fem1aNP_001020877.1 ANK 1 2..31 9/28 (32%)
ANK repeat 40..72 CDD:293786 17/31 (55%)
ANK 2 40..70 16/29 (55%)
Ank_4 41..103 CDD:290365 38/61 (62%)
ANK 43..70 CDD:197603 15/26 (58%)
ANK 82..203 CDD:238125 91/120 (76%)
ANK repeat 82..113 CDD:293786 20/30 (67%)
ANK 3 82..111 19/28 (68%)
Ank_2 87..179 CDD:289560 66/91 (73%)
ANK repeat 115..147 CDD:293786 23/31 (74%)
ANK 4 115..145 21/29 (72%)
ANK repeat 149..179 CDD:293786 21/29 (72%)
ANK 5 149..178 20/28 (71%)
ANK 177..>236 CDD:238125 45/58 (78%)
ANK repeat 182..211 CDD:293786 23/28 (82%)
ANK 6 182..211 23/28 (82%)
Ank_4 183..235 CDD:290365 40/51 (78%)
ANK 7 214..243 19/28 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..265 2/23 (9%)
TPR 1 283..317 22/33 (67%)
TPR 2 375..408 24/32 (75%)
ANK 500..602 CDD:238125 38/102 (37%)
Ank_5 516..573 CDD:290568 26/56 (46%)
ANK repeat 519..563 CDD:293786 19/43 (44%)
ANK 8 519..561 19/41 (46%)
Ank_5 552..605 CDD:290568 22/53 (42%)
ANK repeat 565..596 CDD:293786 13/31 (42%)
ANK 9 565..594 12/29 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2866
eggNOG 1 0.900 - - E2759_KOG0508
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 603 1.000 Inparanoid score I906
OMA 1 1.010 - - QHG48454
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 1 1.000 - - FOG0003207
OrthoInspector 1 1.000 - - otm45569
orthoMCL 1 0.900 - - OOG6_105900
Panther 1 1.100 - - LDO PTHR24173
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X856
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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