DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6966 and Fem1b

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001101627.1 Gene:Fem1b / 315745 RGDID:1304569 Length:627 Species:Rattus norvegicus


Alignment Length:687 Identity:241/687 - (35%)
Similarity:356/687 - (51%) Gaps:96/687 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFNAARDNNLAQLKATLYNKSSVEVGSLIS--AKVNG--ATPLVISCRNGHYDIVEYLLTKCRAN 67
            |:.||.:..:..|.|.|.|:|..::..|:.  ::..|  :|||:|:.||||..:|..||...|..
  Rat     8 VYKAASEGKVLTLAALLLNRSESDIRYLLGYVSQQGGQRSTPLIIAARNGHAKVVRLLLEHYRVQ 72

  Fly    68 VEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRRGANVNSTTRTNSTPLRAACFDGHYEIV 132
            .:|.|:|.|||..|:.|..|||||.|||..:||:||..|||||.||.|||||||||||||..:||
  Rat    73 TQQTGTVRFDGYVIDGATALWCAAGAGHFEVVKLLVSHGANVNHTTVTNSTPLRAACFDGRLDIV 137

  Fly   133 KYLVHHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGSLQI 197
            ||||.:.|:..:||::.:||||||.||||..:.:|||...||.|..:..|.||||..||:|.:.|
  Rat   138 KYLVENNANISIANKYDNTCLMIAAYKGHTDVVRYLLEQRADPNAKAHCGATALHFAAEAGHIDI 202

  Fly   198 LQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLITLPCVSRESRIHALELLGATYV-DRKR- 260
            ::.|:|..|.:.|:.:|||||..|:.:....:||.|::.....|.|||.|||||||::. ||:. 
  Rat   203 VKELIKWRAAIVVNGHGMTPLKVAAESCKADVVELLLSHADCDRRSRIEALELLGASFANDRENY 267

  Fly   261 DMAAALNLWRRALEERAVEPP--LEKKVQEPVPAYEMVREVTSVEELEEMVLDPDEMRMQALVIR 323
            |:....:....|:.||..:..  |||:|..|:.||....|..:.:|||.:..|.|.:.|:.|::|
  Rat   268 DIMKTYHYLYLAMLERFQDGDNILEKEVLPPIHAYGNRTECRNPQELEAIRQDRDALHMEGLIVR 332

  Fly   324 QRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSLLSFAELFS 388
            :||||..:.|.|:.|.:|||.|||...|::||:||.:||.::||    .:..|...||.||::||
  Rat   333 ERILGADNIDVSHPIIYRGAVYADNMEFEQCIKLWLHALHLRQK----GNRNTHKDLLRFAQVFS 393

  Fly   389 FM--LVEAGRLLPRGRVVPPIEPDSMLTIFYKAVKEVERGLAFTLEQQKDQQHPQKQLPAADKSP 451
            .|  |.||.:       .|.||     .:...:|.|:|:.:           :..|.:..||...
  Rat   394 QMIHLNEAVK-------APDIE-----CVLRCSVLEIEQSM-----------NRVKNISDADVHS 435

  Fly   452 SCSASSSASSSSSTTLLSAHQHDCNHDPNALSRTMISAIHIGCLLSSLLDTDALSPEMRRQVMGA 516
            :..                 .::||         :.:.:::.|:.:.    ...|.|.:.::...
  Rat   436 AMD-----------------NYECN---------LYTFLYLVCISTK----TQCSEEDQCRINKQ 470

  Fly   517 LYRLNRLKVRVRFDRTALHYACYREGTLAGRYPS--CQFPSVTLAKALLEVGADPNAIDEAGNTP 579
            :|.|..|..|.|...|.||.|......:...:.:  |.||:..:.|.||:.||:.||:|..||:.
  Rat   471 IYNLIHLDPRTREGFTLLHLAVNSNTPVDDFHTNDVCSFPNALVTKLLLDCGAEVNAVDNEGNSA 535

  Fly   580 LHLATMQPYVEPLSHI---------LLEGGAHLDTKNYAGETFESLLAPTPMHK--------IID 627
            ||:...  |..|:|..         |:|.|||.|..|...:        ||:.|        ::.
  Rat   536 LHIIVQ--YNRPISDFLTLHSIIISLVEAGAHTDMTNKQNK--------TPLDKSTTGVSEILLK 590

  Fly   628 PMKYTTLACLAARTIKKHDIRYEGTVPATLYEFIELH 664
            .....:|.|||||.::.:||.|:..:|.||.||:..|
  Rat   591 TQMKMSLKCLAARAVRANDINYQDQIPRTLEEFVGFH 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 46/105 (44%)
ANK 40..169 CDD:238125 73/130 (56%)
ANK repeat 40..72 CDD:293786 14/33 (42%)
ANK repeat 86..113 CDD:293786 17/26 (65%)
Ank_2 87..177 CDD:289560 56/89 (63%)
ANK 110..234 CDD:238125 62/123 (50%)
ANK repeat 118..146 CDD:293786 17/27 (63%)
ANK repeat 148..179 CDD:293786 16/30 (53%)
ANK repeat 181..210 CDD:293786 12/28 (43%)
Ank_4 182..234 CDD:290365 21/51 (41%)
ANK 528..>612 CDD:238125 30/94 (32%)
ANK repeat 529..573 CDD:293786 14/45 (31%)
ANK repeat 575..607 CDD:293786 13/40 (33%)
Fem1bNP_001101627.1 Ank_2 11..117 CDD:403870 46/105 (44%)
ANK 1 45..74 12/28 (43%)
ANK repeat 48..85 CDD:293786 18/36 (50%)
ANK repeat 87..118 CDD:293786 18/30 (60%)
ANK 2 87..116 17/28 (61%)
Ank_2 92..183 CDD:403870 57/90 (63%)
ANK repeat 120..151 CDD:293786 20/30 (67%)
ANK 3 120..149 20/28 (71%)
ANK repeat 153..183 CDD:293786 16/29 (55%)
ANK 4 153..182 15/28 (54%)
Ank_2 158..247 CDD:403870 36/88 (41%)
ANK 5 186..215 12/28 (43%)
ANK repeat 186..211 CDD:293786 11/24 (46%)
ANK 6 218..248 10/29 (34%)
ANK repeat 218..247 CDD:293786 9/28 (32%)
TPR 344..377 17/36 (47%)
PHA03095 475..>613 CDD:222980 43/147 (29%)
ANK repeat 483..529 CDD:293786 14/45 (31%)
ANK 7 483..527 12/43 (28%)
ANK repeat 531..570 CDD:293786 13/40 (33%)
ANK 8 531..568 12/38 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X856
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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