DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6966 and fem-1

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_500824.1 Gene:fem-1 / 177335 WormBaseID:WBGene00001411 Length:656 Species:Caenorhabditis elegans


Alignment Length:699 Identity:240/699 - (34%)
Similarity:363/699 - (51%) Gaps:87/699 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YKFIVFNAARDNNLAQLKATLYNKSSVE--VGSLISAKVNGATPLVISCRNGHYDIVEYLLTKCR 65
            ::.:::|||...||.::|....|..:..  :....::..:|..||||:.||||.::||||| :..
 Worm     8 FRTVIYNAAAVGNLQRIKVFTINSRNDRQWIIDCFNSDQDGRYPLVIAARNGHANVVEYLL-EIG 71

  Fly    66 ANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRR-GANVNSTTRTNSTPLRAACFDGHY 129
            |:....|.|.||.|.|:..||||.|:||||:.|||:|:.: .|:||..|.|.|||||.||:|||.
 Worm    72 ADPSVRGVVEFDNENIQGTPPLWAASAAGHIEIVKLLIEKANADVNQATNTRSTPLRGACYDGHL 136

  Fly   130 EIVKYLVHHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGS 194
            :|||||:..|||..:.|||||||||||.|:....|.:.||....|||:.:.:|||||||.||||:
 Worm   137 DIVKYLLEKGADPHIPNRHGHTCLMIASYRNKVGIVEELLKTGIDVNKKTERGNTALHDAAESGN 201

  Fly   195 LQILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLI-TLPCVSRESRIH---ALELLGATY 255
            ::::::|||||:.:..|..|:.||:.|:::|.:.::..|. .:|     |.||   ||:|||:|.
 Worm   202 VEVVKILLKHGSVLMKDIQGVDPLMGAALSGFLDVLNVLADQMP-----SGIHKRDALKLLGSTL 261

  Fly   256 VDRKRDMAAALNLWRRALEE--RAVEPPLEKKVQ---EPVPAYEMVREVTSVEELEEMVLDPDEM 315
            :|:|.|..:|:|.|::::|.  .|.:..|.::::   ||...||..||..::.::|.:..:.:..
 Worm   262 LDKKMDAMSAMNCWKQSMEVPLHADDLRLVREMETFFEPQEVYEYQREAQNIAQVELLDGNIEAQ 326

  Fly   316 RMQALVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSL 380
            ||||||||:||||..|.|..||:|||||.|.|.|:.:||.:||.:||.:|||...||...|.::|
 Worm   327 RMQALVIRERILGGAHTDVHYYLRFRGAVYCDMGQMNRCYDLWKHALELQQKHFAPLYYGTITTL 391

  Fly   381 LSFAELFSFMLVE------AGRLLPRGRVVPPIEPDSMLTIFYKAVKEVERGLAFT----LEQQK 435
            .||.|.||..|.:      |.|.|       .:....:..:|.....|:||..|:|    ||   
 Worm   392 QSFHETFSMSLNDFVNNHHANRNL-------RVRSSWVKYVFNGVCLELERAAAWTGAPLLE--- 446

  Fly   436 DQQHPQKQLPAADKSPSCSASSSASSSSSTTLLSAHQHDCNHDPNALSRTMISAIHIGCLLSSLL 500
            |.:...|:        .|..::..|.......::.|.      .|.|.|..:.:.||.       
 Worm   447 DTECCGKE--------RCQHATEESEYKKLVYVAVHL------VNVLERLSLPSAHID------- 490

  Fly   501 DTDALSPEMRRQVMGALYRLNRLKVRVRFDRTALHYACYREGTLAGRYPSCQFPSVTLAKA---- 561
            |:|. ..|.:..|...:...:.|.:.:      ||:      ||..|.|......:.|.||    
 Worm   491 DSDE-EKEPKADVRRLMIVCHELHIPL------LHH------TLEERIPDSNSAELGLPKAAVLE 542

  Fly   562 -LLEVGADPNAIDEAGNTPLH-LATMQPYVEPLSHILLEGGAHLDTKNYAGETFESLLAPTPM-- 622
             |||:..|.||.|:..:||:| |...:.:.:.|...||..|..|..:|..|:...:::.....  
 Worm   543 QLLELDLDVNATDKNNDTPMHILLRAREFRKSLVRALLVRGTWLFARNRHGDVVLNVMKRMKALN 607

  Fly   623 HKIIDPM---KYTTLACLAARTIK----KHDIRYEGTVPATLYEFIELH 664
            |...|.:   ::.|||.|.|..::    |..:..|..:|..|..|...|
 Worm   608 HANFDDLPLGRHITLAGLVANAMRVKYPKKFVGVEEQMPLELRRFYLAH 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 43/104 (41%)
ANK 40..169 CDD:238125 70/129 (54%)
ANK repeat 40..72 CDD:293786 15/31 (48%)
ANK repeat 86..113 CDD:293786 15/27 (56%)
Ank_2 87..177 CDD:289560 51/90 (57%)
ANK 110..234 CDD:238125 61/123 (50%)
ANK repeat 118..146 CDD:293786 17/27 (63%)
ANK repeat 148..179 CDD:293786 16/30 (53%)
ANK repeat 181..210 CDD:293786 16/28 (57%)
Ank_4 182..234 CDD:290365 22/51 (43%)
ANK 528..>612 CDD:238125 27/89 (30%)
ANK repeat 529..573 CDD:293786 15/48 (31%)
ANK repeat 575..607 CDD:293786 9/32 (28%)
fem-1NP_500824.1 ANK repeat 7..35 CDD:293786 7/26 (27%)
Ank_2 12..118 CDD:289560 43/106 (41%)
ANK repeat 47..86 CDD:293786 19/39 (49%)
Ank 47..77 CDD:278452 15/30 (50%)
ANK 83..209 CDD:238125 68/125 (54%)
ANK repeat 92..120 CDD:293786 15/27 (56%)
Ank_2 93..185 CDD:289560 52/91 (57%)
ANK repeat 125..153 CDD:293786 17/27 (63%)
ANK repeat 155..186 CDD:293786 16/30 (53%)
ANK repeat 188..212 CDD:293786 14/23 (61%)
Ank_4 189..240 CDD:290365 22/50 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10606
Inparanoid 1 1.050 330 1.000 Inparanoid score I1440
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 1 1.000 - - FOG0003207
OrthoInspector 1 1.000 - - oto17382
orthoMCL 1 0.900 - - OOG6_105900
Panther 1 1.100 - - LDO PTHR24173
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4568
SonicParanoid 1 1.000 - - X856
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.000

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