DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6966 and fem1c

DIOPT Version :9

Sequence 1:NP_001097796.1 Gene:CG6966 / 41816 FlyBaseID:FBgn0038286 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_002931764.1 Gene:fem1c / 100493200 XenbaseID:XB-GENE-998529 Length:617 Species:Xenopus tropicalis


Alignment Length:671 Identity:335/671 - (49%)
Similarity:428/671 - (63%) Gaps:62/671 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYKFIVFNAARDNNLAQLKATLYNKSSVEVGSLISAKVNGATPLVISCRNGHYDIVEYLLTKCR 65
            ||.|..|||||||..|..|...|.||:..||..|:|.|.||||||:::.|.||.|:|:|||.:|.
 Frog     1 MDLKTAVFNAARDGKLRLLSKLLENKAKDEVVVLMSEKTNGATPLLMAARYGHLDMVDYLLDQCS 65

  Fly    66 ANVEQVGSVSFDGEPIEDAPPLWCAAAAGHLGIVKMLVRRGANVNSTTRTNSTPLRAACFDGHYE 130
            |:||..|||:||||.||.|||||.|:|||||.:|:.|:..||:||:||.||||||||||||||.|
 Frog    66 ASVEIGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLDHGASVNNTTLTNSTPLRAACFDGHLE 130

  Fly   131 IVKYLVHHGADFEVANRHGHTCLMIACYKGHFRIAQYLLSLNADVNRCSVKGNTALHDCAESGSL 195
            ||||||.|.||.|||||||||||||:|||||..|||:||...|||||.|||||||||||||||||
 Frog   131 IVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQFLLEKGADVNRKSVKGNTALHDCAESGSL 195

  Fly   196 QILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLITLPCVSRESRIHALELLGATYVDRKR 260
            :|:|:|||:||.|:.|.|||||||:||||||..||:.|...|..|:..||:||||||||:||:||
 Frog   196 EIMQMLLKYGARMEKDGYGMTPLLSASVTGHTNIVDFLTQHPQTSKIERINALELLGATFVDKKR 260

  Fly   261 DMAAALNLWRRALEER------AVEPPLEKKVQEPVPAYEMVREVTSVEELEEMVLDPDEMRMQA 319
            |:..||..|:||::.|      .:..|   :.|..:.||:..|||.:.|||:.::.|||||||||
 Frog   261 DLLGALKYWKRAMDMRYSDRTNIISKP---EPQTLIMAYDYAREVNTAEELDNLIADPDEMRMQA 322

  Fly   320 LVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPLSPMTQSSLLSFA 384
            |:||:|||||:|||||||||:|||.|||:|.|.|||.||.|||.|||..|.||||||.|||||||
 Frog   323 LLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINLWKYALDMQQNNLDPLSPMTASSLLSFA 387

  Fly   385 ELFSFMLVEAGRLLPRGRVVPPIEPDSMLTIFYKAVKEVERGLAFTLEQQKDQQHPQKQLPAADK 449
            |||||||.:..    :|.:...:..|.::.|..|:|.|::|.:       |....|..|:     
 Frog   388 ELFSFMLQDRA----KGLLGTTVTFDDLMGILCKSVMEIDRAV-------KQTAPPPDQV----- 436

  Fly   450 SPSCSASSSASSSSSTTLLSAHQHDCNHDPNALSRTMISAIHIGCLLSSLLDTDALSPEMRRQVM 514
                                           .|::.:...:|:.|||..:    ..||:......
 Frog   437 -------------------------------QLNKALSIILHLICLLEKV----PCSPDQEHFKK 466

  Fly   515 GALYRLNRLKVRVRFDRTALHYACYREGTLAGRYPSCQFPSVTLAKALLEVGADPNAIDEAGNTP 579
            ..:||..:|..:.:.:.:.||.|..:..|..||||.|:|||..:...|||.|||.|..|...|:|
 Frog   467 QNIYRFLKLHPKGKNNFSPLHLAVDKNTTCVGRYPVCKFPSFQVTAILLECGADVNVRDAEQNSP 531

  Fly   580 LHLATMQPYVEPLSHILLEGGAHLDTKNYAGETFESLLAPTPMHK-IIDPMKYTTLACLAARTIK 643
            ||:|.:..:.: :.::|::.|||.|:.|...:|...||....|.| :|.|:.:|||.|||||.|.
 Frog   532 LHIAALNNHPD-IMNLLVKSGAHFDSTNSHNQTACDLLDEKEMAKNLIQPINHTTLQCLAARVIV 595

  Fly   644 KHDIRYEGTVPATLYEFIELH 664
            ||:|:|:..:|..|..|:.||
 Frog   596 KHNIQYKQEIPEKLESFVLLH 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6966NP_001097796.1 Ank_2 10..112 CDD:289560 58/101 (57%)
ANK 40..169 CDD:238125 91/128 (71%)
ANK repeat 40..72 CDD:293786 18/31 (58%)
ANK repeat 86..113 CDD:293786 15/26 (58%)
Ank_2 87..177 CDD:289560 66/89 (74%)
ANK 110..234 CDD:238125 96/123 (78%)
ANK repeat 118..146 CDD:293786 23/27 (85%)
ANK repeat 148..179 CDD:293786 23/30 (77%)
ANK repeat 181..210 CDD:293786 23/28 (82%)
Ank_4 182..234 CDD:290365 38/51 (75%)
ANK 528..>612 CDD:238125 31/83 (37%)
ANK repeat 529..573 CDD:293786 19/43 (44%)
ANK repeat 575..607 CDD:293786 10/31 (32%)
fem1cXP_002931764.1 ANK repeat 5..38 CDD:293786 16/32 (50%)
Ank_2 10..110 CDD:372319 56/99 (57%)
ANK repeat 40..75 CDD:293786 20/34 (59%)
ANK repeat 82..113 CDD:293786 18/30 (60%)
Ank_2 87..178 CDD:372319 67/90 (74%)
ANK repeat 118..146 CDD:293786 23/27 (85%)
ANK repeat 148..179 CDD:293786 23/30 (77%)
Ank_2 153..236 CDD:372319 60/82 (73%)
PHA02876 <164..>554 CDD:165207 199/444 (45%)
ANK repeat 181..209 CDD:293786 22/27 (81%)
ANKYR <457..599 CDD:223738 54/142 (38%)
ANK repeat 481..525 CDD:293786 19/43 (44%)
ANK repeat 527..552 CDD:293786 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2925
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10606
Inparanoid 1 1.050 602 1.000 Inparanoid score I929
OMA 1 1.010 - - QHG48454
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 1 1.000 - - FOG0003207
OrthoInspector 1 1.000 - - oto103987
Panther 1 1.100 - - O PTHR24173
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4568
SonicParanoid 1 1.000 - - X856
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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