DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6974 and hch-1

DIOPT Version :10

Sequence 1:NP_650414.1 Gene:CG6974 / 41815 FlyBaseID:FBgn0038285 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_510440.1 Gene:hch-1 / 181564 WormBaseID:WBGene00001828 Length:605 Species:Caenorhabditis elegans


Alignment Length:43 Identity:14/43 - (32%)
Similarity:22/43 - (51%) Gaps:7/43 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSEVEDGLVVEEELDENEPHPSTSTNILNQDDVESEMNRILST 53
            |.|.:..||.|.|:||.|       .:..:|:..|::||:..|
 Worm   237 SEEDDVELVDENEMDEEE-------LVEEKDEETSKVNRVSKT 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6974NP_650414.1 ZnMc_astacin_like 59..249 CDD:239807
hch-1NP_510440.1 Astacin 132..323 CDD:426242 14/43 (33%)
CUB 386..466 CDD:214483
TSP1 533..565 CDD:214559
Blue background indicates that the domain is not in the aligned region.

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