DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Aa and CIC1

DIOPT Version :10

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_011919.1 Gene:CIC1 / 856449 SGDID:S000001094 Length:376 Species:Saccharomyces cerevisiae


Alignment Length:157 Identity:38/157 - (24%)
Similarity:70/157 - (44%) Gaps:29/157 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DCLDVEALKK----LNKDPKLTKKLSKAYDVF-------LASESIIKQIPRLLGPGLTNAGKFLT 136
            |.||.|.:|.    ..||.|...|..:|.:.|       ||.:||:..:|:|:|....|..: .|
Yeast   142 DQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKVE-TT 205

  Fly   137 PLARGESMSSKIKIL----STKKKHMKRM-------ECLSVNVGHV-GMHPEELARNIAISINFL 189
            |::.....:.:..:.    :.||.:|.::       ..|:|::|:: .:.|||...|:.:....|
Yeast   206 PISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLEWLRPEEFVDNVELISEQL 270

  Fly   190 VSLLKDNWQNVRSLHIKSSLGVPHQLY 216
            :...:     :||:.||::......||
Yeast   271 IKAYQ-----IRSIFIKTNRSPVLPLY 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:469720 36/155 (23%)
CIC1NP_011919.1 Ribosomal_L1 77..287 CDD:459905 36/150 (24%)

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