DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL10Aa and MRPL1

DIOPT Version :9

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_010401.1 Gene:MRPL1 / 851694 SGDID:S000002523 Length:285 Species:Saccharomyces cerevisiae


Alignment Length:229 Identity:51/229 - (22%)
Similarity:90/229 - (39%) Gaps:50/229 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IYVAVKNIL--LNSQAKG-PDCLETVELQ---IGLRDYDPDKCKRFHGSVLLHHLAVPQ----LK 64
            :|:.|...|  |.:...| |...:|:.|.   :|.|...|     ..|||     ..|:    :|
Yeast    73 LYMPVTKALRYLRAAEVGRPQSQQTINLTTLVVGERGTAP-----LSGSV-----TFPKPLRYIK 127

  Fly    65 VCVFGDQE-------HCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAY---DVFLASESIIKQ 119
            :..|.:.|       ..|....||    ..:.:.|: |..:::....||:   |:..|.:|   |
Yeast   128 IAAFTNDESKLEELREKYPNHLIG----GADLVAKI-KSGEISVDFDKAFATPDIVPALQS---Q 184

  Fly   120 IPRLLGPGLTNAGKFLTPLARGESMSSKIKILSTKK----KHMKRMECLSVNVGHVGMHPEELAR 180
            :.|:|||      :.:.|..:..::|..|..|..:.    ...:|...:|:.||.......|:.:
Yeast   185 VARILGP------RGVLPSVKKGTVSDDISSLLQESLGSMPFRQRGNSISIGVGKCYFTDREILQ 243

  Fly   181 NIAISINFLVSLLKDNWQNVR-SLHIKSSLGVPH 213
            || ||.........||.::.: ::..|::|...|
Yeast   244 NI-ISARAAFKTAVDNQKSKKPNILSKTTLSSTH 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:294228 51/229 (22%)
MRPL1NP_010401.1 rplA_mito 75..216 CDD:273480 36/164 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.