DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Aa and AT3G58660

DIOPT Version :10

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_191425.1 Gene:AT3G58660 / 825035 AraportID:AT3G58660 Length:446 Species:Arabidopsis thaliana


Alignment Length:252 Identity:70/252 - (27%)
Similarity:105/252 - (41%) Gaps:58/252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKVSRDTIYVAVKNILLN-----SQAKGPDCLETVELQ---IGLRDYDPDKCK-RFHGSVLLHHL 58
            |:||..|:..|: |.|:|     |:.:.|..||..||.   :.|:.. |.|.: ..:...|.|.|
plant    22 SRVSPKTVESAL-NGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKI-PQKTRTNAYRIPLPHPL 84

  Fly    59 AVPQL---KVCVFGD---------QEHCYKAKAIGVDCLDVEALKKLNKDPK---LTKKLSKAYD 108
            ..|.:   ::|:..|         .:...|.|:..:....|..|.||..|.|   ..:||..:||
plant    85 INPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEAKRKLCDSYD 149

  Fly   109 VFLASESIIKQIPRLLGPGLTNAGKFLTPLARGESMSSKIKI-LSTKKKHMKRM----------- 161
            :|.....||..:||::|.      ||.|        |.||.: |..|.::.|..           
plant   150 MFFTDRRIIPLLPRVIGK------KFFT--------SKKIPVALDLKHRNWKHQIEKACGSAMFF 200

  Fly   162 ----ECLSVNVGHVGMHPEELARNIAISINFLVSLLKDNWQNVRSLHIK--SSLGVP 212
                .|..:.||.:.|...|:..|:..::|.||..|.:.|..|||||:|  .||.:|
plant   201 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALP 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:469720 70/252 (28%)
AT3G58660NP_191425.1 Ribosomal_L1 53..253 CDD:459905 56/214 (26%)

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