DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Aa and mrpl1

DIOPT Version :9

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001191062.1 Gene:mrpl1 / 553284 ZFINID:ZDB-GENE-060526-311 Length:316 Species:Danio rerio


Alignment Length:207 Identity:47/207 - (22%)
Similarity:79/207 - (38%) Gaps:32/207 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLR-DYDPDKCKRFHGSVLLHHLAVPQL- 63
            ||....|....:.|...:|.|..|.....|...:.|.|| :...:|.::....|...||..|.. 
Zfish    89 MVRYYPRPLYELTVAIDMLKSFQKLDFSAENQPIYINLRLNMKLEKKRKLDPFVRTIHLPHPFKS 153

  Fly    64 ---KVCVF---GDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQIPR 122
               ||.||   .||..........| ...||..:|:..| ::|.      |.:||...|   :|:
Zfish   154 DINKVVVFTEKPDQARIALENGAAV-AGGVELFEKILAD-EITA------DFYLAEPDI---LPK 207

  Fly   123 LLGPGLTNAGKFLTPLAR----GESMSSKIKILSTKKKHMKRMECLSVNVGHVGMHPEELARNIA 183
            |:  .|.|..:...|.::    |.::...:::..|..:::.....::..|..:.|..|.:..||.
Zfish   208 LV--PLKNKLRKKFPKSKRGTVGINIPRMLELFKTGHEYIVEDIYVNTEVATLDMPKEHILENIH 270

  Fly   184 ISINFLVSLLKD 195
                   ::|||
Zfish   271 -------TILKD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:294228 45/205 (22%)
mrpl1NP_001191062.1 Ribosomal_L1 98..241 CDD:294228 35/155 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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