DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Aa and CG13096

DIOPT Version :10

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_609236.2 Gene:CG13096 / 34183 FlyBaseID:FBgn0032050 Length:681 Species:Drosophila melanogaster


Alignment Length:237 Identity:51/237 - (21%)
Similarity:83/237 - (35%) Gaps:58/237 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VSKVSRDTIYVAVKNILLNSQAKGPDC---------------------LETVELQIGLR-DYDPD 44
            |.|....:|:...:.:|.....|.|.|                     |...:||.|.: ||||.
  Fly   289 VEKKKNTSIFSDYRYVLQVCSYKIPSCPKRMVKLNLKHSLVGKDDDVALIVPDLQRGAKFDYDPT 353

  Fly    45 KCKRFHGSVLLHHLAVPQ-LKVCVFG---DQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSK 105
            |   .|...:|....|.| |.|..|.   ::...::||                      :|...
  Fly   354 K---QHYEDMLREAGVKQRLTVVPFNQLRNEMGSFEAK----------------------RKFLN 393

  Fly   106 AYDVFLASESIIKQIPRLLGPGLTNAGKFLTPLARGESMSSKI------KILSTKKKHMKRMECL 164
            :||..|....:..|....||.........|..| |....:.|:      .:..|..:.:.:.:.:
  Fly   394 SYDYLLCDGRLSGQATAFLGKNTQKPRNVLHSL-RLSKDNDKLPQEVTRALTRTAFRQLSKGDLI 457

  Fly   165 SVNVGHVGMHPEELARNIAISINFLVSLLKDNWQNVRSLHIK 206
            :|.||:..:..|:||.||.:.|..|..:......|:||:::|
  Fly   458 AVPVGNHEITAEQLAENILLVIKQLQEVYPGGLANIRSMYLK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:469720 50/236 (21%)
CG13096NP_609236.2 PTZ00121 <41..>301 CDD:173412 3/11 (27%)
Ribosomal_L1 277..510 CDD:238235 51/237 (22%)

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