DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Aa and mRpL1

DIOPT Version :10

Sequence 1:NP_650410.1 Gene:RpL10Aa / 41811 FlyBaseID:FBgn0038281 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_321348.4 Gene:mRpL1 / 1281437 VectorBaseID:AGAMI1_004175 Length:363 Species:Anopheles gambiae


Alignment Length:239 Identity:47/239 - (19%)
Similarity:86/239 - (35%) Gaps:75/239 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VSKVSRDTIYVAVKNILLNSQAKGPDCLET--------VELQIGLRDYDPDKCKRFHGSVLLHHL 58
            |||..:..:|...:.|..:.:...|.....        |||.:     ..:|..||..: ....:
Mosquito    90 VSKYYKWRVYTVEEAIQCHRETHHPTVYNLPNAPLYAHVELNM-----QAEKVTRFVDN-FQRMV 148

  Fly    59 AVP-------QLKVCVFG-DQEHCYKAKAIGVDCL-DVEALKKL-NKDPKLTKKLSKAYDVFLAS 113
            |:|       ...:.||. .|:...:||..|...: .:|.:|:: |.|.:|::     |...||.
Mosquito   149 AIPHRFEHGENRNIIVFAKGQDPLKEAKDAGATLVGGMELIKEIQNGDLQLSE-----YPFVLAH 208

  Fly   114 ESIIKQIPRLLGPGLTNAGKFLTPLARGESMSSKIKILSTKKKHMKRMECLSVNVGHVGMHPEEL 178
            .:|:.::  ::..||....||..|.:                             |.:|::..|:
Mosquito   209 PNILPEL--VVIRGLLKKNKFPNPRS-----------------------------GTLGVNLAEM 242

  Fly   179 ARNIAISINFLVSLLKDNWQ-------------NVRSLHIKSSL 209
            .:..|..||:  |..||..|             .:.:.|::|:|
Mosquito   243 IQKYAHGINY--SAAKDEQQKDFGSIVACIGTLQMEAKHLESNL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AaNP_650410.1 Ribosomal_L1 3..216 CDD:469720 46/238 (19%)
mRpL1XP_321348.4 None

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