DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sdr and ROS1

DIOPT Version :9

Sequence 1:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_011534351.1 Gene:ROS1 / 6098 HGNCID:10261 Length:2357 Species:Homo sapiens


Alignment Length:1070 Identity:190/1070 - (17%)
Similarity:342/1070 - (31%) Gaps:384/1070 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 THVVGHVRLAYVDLT--DVSGN------YSLDSLASN---------------------VTEISDY 95
            |.:|.||:|...|:.  .|.|.      ||::|...|                     ..::||.
Human   788 TDIVTHVKLLVNDMVVDSVGGYLYWTTLYSVESTRLNGESSLVLQTQPWFSGKKVIALTLDLSDG 852

  Fly    96 LMVY-----RCTGLISLQSIFPRLRIIRGQELLFD---------------QYSLVVYENR----- 135
            |:.:     :|..|.:        .::|||....|               |.:|:.|..|     
Human   853 LLYWLVQDSQCIHLYT--------AVLRGQSSTGDTTITEFAAWSTSEISQNALMYYSGRLFWIN 909

  Fly   136 -----NLRELG------LVELLRI-QSGFIRVESNPL---LCFVETVDWIYLMGNATRQHFSLKH 185
                 ..:|:|      ::|..|. |...|:....||   ..|...|    :..:.....|.::.
Human   910 GFRIITTQEIGQKTSVSVLEPARFNQFTIIQTSLKPLPGNFSFTPKV----IPDSVQESSFRIEG 970

  Fly   186 NRPQSQCPLCGSLSADF-------EFIRNS----SER---------------CWNVNTT------ 218
            |....|....|..:.|:       ||..:|    ||:               .:|::.|      
Human   971 NASSFQILWNGPPAVDWGVVFYSVEFSAHSKFLASEQHSLPVFTVEGLEPYALFNLSVTPYTYWG 1035

  Fly   219 -------QLR--------PQPPRLKDCPIACGLNGCDSAGKCCDHNCVTGCYSQNCSLCANYQGR 268
                   .||        |:.||:...|          :||||:.|.|...:..|.....|    
Human  1036 KGPKTSLSLRAPETVPSAPENPRIFILP----------SGKCCNKNEVVVEFRWNKPKHEN---- 1086

  Fly   269 MGCVNQCVASYELNKRRCIGHRECRE---LGRIPLIRGYQCVKKCP----GNQKEILVAKGIIHC 326
             |.:.:....|.:: .:.|.::.|.:   :...|.:..:|.....|    ..|.....:||    
Human  1087 -GVLTKFEIFYNIS-NQSITNKTCEDWIAVNVTPSVMSFQLEGMSPRCFIAFQVRAFTSKG---- 1145

  Fly   327 QVECNGDFH--VKS-AADLEVLQDCVTINGSLTIEL---------TNIKEKIVDAL----ENALA 375
                .|.:.  ||| .:::......:|:.|:..:.|         |...|:::.|:    :|.: 
Human  1146 ----PGPYADVVKSTTSEINPFPHLITLLGNKIVFLDMDQNQVVWTFSAERVISAVCYTADNEM- 1205

  Fly   376 SVKEITGY------LKVIH-----SAQLMSLTFLQNLDAIRGDKLVENKY-ALYVVNN------Y 422
                  ||      |.::|     |::|...:.:.::..|..|.:..:.| ||....|      .
Human  1206 ------GYYAEGDSLFLLHLHNRSSSELFQDSLVFDITVITIDWISRHLYFALKESQNGMQVFDV 1264

  Fly   423 HLEH-IWPPNHLVIIQRGT--LFFHLNP---RLCYEKI-----------------HQ-LQGSLKS 463
            .||| :..|..:.|..|.:  :.|.:.|   ||.:.::                 |: ||.:..:
Human  1265 DLEHKVKYPREVKIHNRNSTIISFSVYPLLSRLYWTEVSNFGYQMFYYSIISHTLHRILQPTATN 1329

  Fly   464 GEN-------------ISVADVSPNSNGERVICGDAVRSLNPKVEDLNSTAVRIILDYMDWEGME 515
            .:|             :|.|.....||.|:.:...|      |.:::.:         ||.||.:
Human  1330 QQNKRNQCSCNVTEFELSGAMAIDTSNLEKPLIYFA------KAQEIWA---------MDLEGCQ 1379

  Fly   516 -------------------TLIGYSYHYKEAPVQNVTMYDGRHGCGHDNWLMDVVPNQSRRHVI- 560
                               |:.|...::......:..:|..:.|.|.   ::..|.....||:: 
Human  1380 CWRVITVPAMLAGKTLVSLTVDGDLIYWIITAKDSTQIYQAKKGNGA---IVSQVKALRSRHILA 1441

  Fly   561 --SGLKPYTQYAYF----------VKTLTRTEYHIQID-AYSKIGYFQTLPDRPSPVLRIY---- 608
              |.::|:...|:.          :...|.|...|::. |.:.:.::..  ..|:|...:|    
Human  1442 YSSVMQPFPDKAFLSLASDTVEPTILNATNTSLTIRLPLAKTNLTWYGI--TSPTPTYLVYYAEV 1504

  Fly   609 ----GSSEISSQIL-----------LHWWPPRRPNGVIKNYFV-TAEKYNATKE--AKDKNYV-- 653
                .||::..:||           |..:........:|||:. ..|.....||  .|.||.|  
Human  1505 NDRKNSSDLKYRILEFQDSIALIEDLQPFSTYMIQIAVKNYYSDPLEHLPPGKEIWGKTKNGVPE 1569

  Fly   654 NVELENAKDIDCECAGVLPYYSGPQPDDEDYYNKEQITYEDALPNLIYVSRNHDYRRKEFE---- 714
            .|:|.|. .:..:.:.::.:....:|:..    ||.:.|:.|:.:|..:... ..|:.||.    
Human  1570 AVQLINT-TVRSDTSLIISWRESHKPNGP----KESVRYQLAISHLALIPET-PLRQSEFPNGRL 1628

  Fly   715 ---------------KVI---------NYEHLLSIKKDEEPTRPPTTTPAPTNATLAKERLAAIN 755
                           ||:         ...|.::::....|.:|.:.  .|.|.:|.....|.:|
Human  1629 TLLVTRLSGGNIYVLKVLACHSEEMWCTESHPVTVEMFNTPEKPYSL--VPENTSLQFNWKAPLN 1691

  Fly   756 YENYRLNSEKKQRDLQDLDQHKYT-IRHALPKCQNSHASVVQQVEEKCVAEEPLSGYELPGTQHF 819
            ....|...|        |.:.||. ..|....|....|.|..                       
Human  1692 VNLIRFWVE--------LQKWKYNEFYHVKTSCSQGPAYVCN----------------------- 1725

  Fly   820 YCLSQLEPETHYRITIRACVEGVVNGCSTP 849
              ::.|:|.|.|.:.:....:...|..|.|
Human  1726 --ITNLQPYTSYNVRVVVVYKTGENSTSLP 1753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 35/181 (19%)
Furin-like 209..332 CDD:279142 28/165 (17%)
Recep_L_domain 347..461 CDD:279382 32/168 (19%)
FN3 491..578 CDD:214495 16/118 (14%)
ROS1XP_011534351.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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