DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sdr and ephb6

DIOPT Version :10

Sequence 1:NP_650408.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_005173575.1 Gene:ephb6 / 572411 ZFINID:ZDB-GENE-100922-51 Length:1003 Species:Danio rerio


Alignment Length:186 Identity:44/186 - (23%)
Similarity:61/186 - (32%) Gaps:71/186 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   545 NWLMDVV---PNQSRRHVISGLKPYTQYAYFVKT-LTRTEYHIQIDAYSKIGYFQTLPDR----- 600
            :|..:.|   |:|      :|||   |....:|. |||..|.||:.|.:::......|.:     
Zfish   396 SWCGETVTYSPSQ------NGLK---QTRVTLKNLLTRVTYLIQVQAMNEVSALSPFPPQFASIN 451

  Fly   601 -------PSPVLRIYGSSEISSQILLHWWPPRRPNGVIKNYFVTAEKYNATKEAKDKNYVNVELE 658
                   ||.|..::..|.:...|.|.|..|.||||.|..|                        
Zfish   452 FTTSQSVPSEVPMLHQLSRVQDSITLSWPQPDRPNGDILEY------------------------ 492

  Fly   659 NAKDIDCECAGVLPYYSGPQPDDED-----YYNKEQITYEDALPNLIYV----SRN 705
                       .|.||.  :..|||     |.....:|....:|..||.    :||
Zfish   493 -----------QLRYYD--KGSDEDSALSMYSETNTVTVTGLIPGSIYAFQIRARN 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_650408.1 Recep_L_domain 58..173 CDD:460032
Furin-like 210..332 CDD:395614
Recep_L_domain 347..461 CDD:460032
FN3 491..578 CDD:214495 10/36 (28%)
ephb6XP_005173575.1 Ephrin_lbd 22..213 CDD:460198
Ephrin_rec_like <286..318 CDD:429604
FN3 <336..>552 CDD:442628 44/186 (24%)
FN3 473..550 CDD:238020 23/100 (23%)
EphA2_TM 568..638 CDD:464211
Protein Kinases, catalytic domain 636..905 CDD:473864
SAM_superfamily 932..987 CDD:472832
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.