DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdr and Egfr

DIOPT Version :9

Sequence 1:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_476759.1 Gene:Egfr / 37455 FlyBaseID:FBgn0003731 Length:1426 Species:Drosophila melanogaster


Alignment Length:607 Identity:143/607 - (23%)
Similarity:234/607 - (38%) Gaps:153/607 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SLEINKIADLRKLQ----NCTHVVGHVRLAYVDLTDVSGNYSLD-SLASNVTEISDYLMVYRCTG 103
            |:..||....|.|:    |||:|.|::.|.::.      |.:|| |...|:.|::.|:::..   
  Fly   110 SVPSNKEHHYRNLRDRYTNCTYVDGNLELTWLP------NENLDLSFLDNIREVTGYILISH--- 165

  Fly   104 LISLQS-IFPRLRIIRGQELLFDQYSLVVYENR--------NLRELGLVELLRIQSGFIRVESNP 159
             :.::. :||:|:||||:.|    :||.|.|.:        .:..|.:.:|..:.:|.:...:|.
  Fly   166 -VDVKKVVFPKLQIIRGRTL----FSLSVEEEKYALFVTYSKMYTLEIPDLRDVLNGQVGFHNNY 225

  Fly   160 LLCFVETVDWIYLMGNATRQHFSLKHNRPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRPQP 224
            .||.:.|:.|..::.|.|..:::.....|:.:||.|.         .:.:..||.......  |.
  Fly   226 NLCHMRTIQWSEIVSNGTDAYYNYDFTAPERECPKCH---------ESCTHGCWGEGPKNC--QK 279

  Fly   225 PRLKDCPIACGLNGC--DSAGKCCDHNCVTGC---YSQNCSLCANYQGRMGCVNQCVASYELNKR 284
            .....|...|....|  ....:||...|..||   ..::|..|.|:.....|..:|....:.|..
  Fly   280 FSKLTCSPQCAGGRCYGPKPRECCHLFCAGGCTGPTQKDCIACKNFFDEGVCKEECPPMRKYNPT 344

  Fly   285 RCIGHRECRELGRIPLIRGYQCVKKCPGNQKEILVAKG--IIHCQ----------VECNG----- 332
            ..:  .|....|:...  |..|||:|||:   :|...|  :..|.          |.|||     
  Fly   345 TYV--LETNPEGKYAY--GATCVKECPGH---LLRDNGACVRSCPQDKMDKGGECVPCNGPCPKT 402

  Fly   333 --DFHVKSAADLEVLQDCVTINGSLTIELTNIKEKIVDALEN----------------ALASVKE 379
              ...|..|.:::..::|..|:|::.| |........|...|                ..::|||
  Fly   403 CPGVTVLHAGNIDSFRNCTVIDGNIRI-LDQTFSGFQDVYANYTMGPRYIPLDPERLEVFSTVKE 466

  Fly   380 ITGYLKV--IHSAQLMSLTFLQNLDAIRGDKLVENKY-ALYVVNN--YHLEHIWPPNHLVIIQRG 439
            |||||.:  .| .|..:|::.:||:.|.|.:|:|:.: ||.:|.:  |.||    ..:|..|..|
  Fly   467 ITGYLNIEGTH-PQFRNLSYFRNLETIHGRQLMESMFAALAIVKSSLYSLE----MRNLKQISSG 526

  Fly   440 TLFFHLNPRLCYEKIHQLQGSLKS-------GENISVADVSPNSNGERVICGDAV---------- 487
            ::....|..|||....:.....|.       .||:. ||:. ..||  .||.|..          
  Fly   527 SVVIQHNRDLCYVSNIRWPAIQKEPEQKVWVNENLR-ADLC-EKNG--TICSDQCNEDGCWGAGT 587

  Fly   488 -RSLNPKVEDLNSTAVRIILDYMDWEGMETLIGYSYHYKEAPVQNVTMYDGR------------H 539
             :.|..|..:.|.|.   |.|          .||        :.|...:|.|            :
  Fly   588 DQCLTCKNFNFNGTC---IAD----------CGY--------ISNAYKFDNRTCKICHPECRTCN 631

  Fly   540 GCGHDNWLMDVVPNQSRRHVIS 561
            |.|.|: ..:.|..:..:|.:|
  Fly   632 GAGADH-CQECVHVRDGQHCVS 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 33/124 (27%)
Furin-like 209..332 CDD:279142 31/139 (22%)
Recep_L_domain 347..461 CDD:279382 37/134 (28%)
FN3 491..578 CDD:214495 16/83 (19%)
EgfrNP_476759.1 Recep_L_domain 419..547 CDD:279382 37/133 (28%)
GF_recep_IV 572..684 CDD:291509 20/103 (19%)
FU 573..>606 CDD:238021 8/45 (18%)
FU 617..659 CDD:214589 7/37 (19%)
FU 662..716 CDD:214589
FU 739..786 CDD:238021
FU 784..834 CDD:214589
PTKc_EGFR_like 930..1208 CDD:270648
STYKc 938..1194 CDD:214568
Recep_L_domain 128..239 CDD:279382 33/124 (27%)
Furin-like 253..401 CDD:279142 37/165 (22%)
FU 255..292 CDD:214589 8/47 (17%)
FU 302..345 CDD:238021 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455330
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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