DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sdr and CG10702

DIOPT Version :9

Sequence 1:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001188841.1 Gene:CG10702 / 35181 FlyBaseID:FBgn0032752 Length:946 Species:Drosophila melanogaster


Alignment Length:885 Identity:212/885 - (23%)
Similarity:340/885 - (38%) Gaps:227/885 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFLGASSPVLASSDDQTACGSLEI-NKIADLRKLQNCTHVVGHVRLAYVDLTDVSGNYSLDSLA 86
            |:||....| .|.|..:..|.|::| |:..::..|.|||.|.|:|.:..:.: :...|:|..|..
  Fly    12 LMFLALYVP-CAESKKEHECTSIDIRNECKNMHLLDNCTVVTGYVMITLITI-EQRCNFSEYSYP 74

  Fly    87 SNVTEISDYLMVYRCTGLISLQSIFPRLRIIRGQELLFDQYSLVVYENRNLRELGLVELLRIQSG 151
            . :|||:::::.....||:::..:||.|.:|||:. ||..|:|.|.....|.:|...:|:.||.|
  Fly    75 L-LTEITEFMIFTDVRGLVNITEMFPHLTVIRGRR-LFLNYALGVTNMHELEQLVFPKLVAIQRG 137

  Fly   152 FIRVESNPLLCFVETVDWIYLMGNATRQHFSLKHNRPQSQCPLCGSLSADFEFIRNSSERCW--- 213
            .:.:.|.|.||.:..|:|..|  ..||...::.........|:|...         ||..||   
  Fly   138 QVYIGSCPKLCSIGRVNWDLL--TLTRGENNIIMVNKNCSTPVCSGC---------SSSHCWSNH 191

  Fly   214 ----NVNTTQLRPQPPRLKDCPIACGLNGCDSAGKCCDHNCVTGCYSQ-----NCSLCANYQGRM 269
                ::|.....|:          ..:|       .|...|:.||.:.     :||:|.......
  Fly   192 YCQRSINENVANPK----------ANIN-------ACHEECLGGCKNNSSSPADCSVCRGLSDDG 239

  Fly   270 GCVNQCVA-SYEL-NKRRCIGHRECRELGRIPLIRGYQCVKKCP-----GNQKEILVAKG----I 323
            .||..|.. .|.: |.:||....|| .|....:|.|.|||..||     .|:.|.::...    |
  Fly   240 VCVKSCPKDKYVMENYQRCYTKAEC-VLKHGYVISGSQCVAFCPSGYKTNNRSECVLCSPDEACI 303

  Fly   324 IHCQVECNGD-FHVKSAADLEVLQDCVTINGSLTIELTNIKEKIVDA-LENALASVKEITGYLKV 386
            ..|..|..|. |.|.:.||.|.|:.|...||||.|   .|:.|:.:. |..:..|::|:.|::||
  Fly   304 SFCTPEWPGKAFTVYNLADAENLRGCQIFNGSLVI---TIRNKVNETQLYQSFTSMREVRGHVKV 365

  Fly   387 IHSAQLMSLTFLQNLDAIRGDKLVENKYALYVVNNYHLEHIWPPNHLVIIQRGTLFFHLNPRLCY 451
            ..|:||.||.||:||:.:.||.|....|:..:.:|..|..:|.|:..:....|.:|.|.|.:||.
  Fly   366 YRSSQLRSLQFLRNLERVHGDPLENRHYSFILYDNKELSELWTPSRQLEFMEGGMFMHRNNKLCN 430

  Fly   452 EKIHQLQGSLKSGENISVADVSPNSNGERVICGDAVRSLNPKVEDLNSTAVRIILDYMDWEGMET 516
            .::.:.|.::.....:.    |..:|.:.|.|...  .|...|:.....:|:     :.|...:|
  Fly   431 RRMREFQNAVTHDRALD----SLQTNDQEVQCSPL--KLQLYVQKRTHRSVK-----LSWLKSQT 484

  Fly   517 -----------LIGYSYHYK---EAPVQNVTMYDGRHGCGHDNWLM------DVVPNQSRRHV-- 559
                       |.|..||.:   :||:           |...||..      |::.|.:  |.  
  Fly   485 SQKIELIHRPLLPGKLYHEESELDAPI-----------CTRINWKRRLLFPDDLIENGT--HYLF 536

  Fly   560 -ISGLKPYTQYAYFVKTLTRTEYHIQIDAYSKIGYFQTLPDRPS-PVLRIYGSSEISSQILLHWW 622
             :..|:|.|:|...::|....|.|...:|.|::.|.||..|.|. |:|.:...::.|        
  Fly   537 DLDDLQPDTRYVVLLRTFGNDEAHEAYEARSELTYVQTELDIPKPPLLELVKKTDSS-------- 593

  Fly   623 PPRRPNGVIKNYFVTAEKYNATKEAKDKNYVN-----VELENAKDIDCECAGVLPYYSGPQPDDE 682
                                .|.:....::|:     .||.                     ||:
  Fly   594 --------------------LTVQMASHDHVSFLLTVFELS---------------------DDQ 617

  Fly   683 DYYNKEQITYEDALPNLIYVSRNHDYRR-KEFEKVINYEHLLSIKKDEEPTRPPTTTPAPTNATL 746
            ||..:....::.:     ||.::.|..| ..:|   :|:...:.|.::                .
  Fly   618 DYIEQRNYCHQPS-----YVWQDMDGPRWMAYE---DYDDCCAQKAEQ----------------F 658

  Fly   747 AKERLAAINYENYRLNSEKKQRDLQDLDQHKYTIRHALPKCQN-SHASVVQQVEEKCVAEEPLSG 810
            ...|..|...|.||..       |.|.:|           |:. :|..|            .|..
  Fly   659 EDSRFIADMREQYRCT-------LDDREQ-----------CRRLAHTEV------------SLPQ 693

  Fly   811 YELPGTQHFYCLSQLEPETHYRITIRACVEGVVN--GCST 848
            ..|||....|.|..|.....|.:.::||     |  |||:
  Fly   694 LRLPGNTTEYELKALHRYRLYALQLQAC-----NPLGCSS 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 37/114 (32%)
Furin-like 209..332 CDD:279142 35/145 (24%)
Recep_L_domain 347..461 CDD:279382 38/114 (33%)
FN3 491..578 CDD:214495 21/109 (19%)
CG10702NP_001188841.1 Recep_L_domain 47..159 CDD:279382 38/116 (33%)
Furin-like 171..297 CDD:279142 35/152 (23%)
FU 210..258 CDD:238021 12/47 (26%)
Recep_L_domain 328..441 CDD:279382 38/115 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I6775
eggNOG 1 0.900 - - E2759_KOG4258
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D120934at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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