DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdr and ephb4a

DIOPT Version :10

Sequence 1:NP_650408.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_571489.1 Gene:ephb4a / 30688 ZFINID:ZDB-GENE-990415-62 Length:987 Species:Danio rerio


Alignment Length:606 Identity:126/606 - (20%)
Similarity:196/606 - (32%) Gaps:198/606 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 ETVDWIYLMG---NATRQHFSLKHNRPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRPQPPR 226
            ||.:..|...   :||..|.:...| |.::   ..:::||| .:|...|:..||.|.:|.|...|
Zfish   116 ETFNLYYYQSDTDDATATHPAWMEN-PYTK---VDTVAADF-LLRKGGEKKVNVKTLRLGPLSKR 175

  Fly   227 ---------------------LKDCP-IACGLNGC----------DSAGKCCDHNCVTGCYSQNC 259
                                 .|.|| :...|:..          ::.|:|..:....|...:..
Zfish   176 GFYLAFQAQGACMALLSVRVFFKKCPALTRSLSVFPETVPRSLVQEAVGQCVANAAQPGPSPRPP 240

  Fly   260 SLCANYQGRMGCVNQ------CVASYELNKRRCIGHRECR--ELGRIPLIRGYQCVKKCPGNQKE 316
            .:.....|:.  |:|      |:..:|.:.    |..|||  .:|...:..|......||.|.: 
Zfish   241 KMFCGEDGQW--VDQPTTTCTCLPGFEASH----GELECRACPVGLFKMGSGTGPCSVCPENSQ- 298

  Fly   317 ILVAKGIIHCQVECNGDFH--VKSAADLEVLQDCV-----------TING-SLTIELTNIKEKIV 367
             ....|...|  .|...|:  :..:||    ..|.           .:|. |||:|.:       
Zfish   299 -TGETGSAAC--VCRSGFYRALSDSAD----TPCTRPPSSPRSPVPQVNDTSLTLEWS------- 349

  Fly   368 DALENALASVKEITGYLKVIHSAQLMSLTFLQNLDAIRGDKLVENKYALYVVNNYHLEHIWPPNH 432
            :.|::.        |...:.:|.:....:...:...:..|.:           ||.      |:.
Zfish   350 EPLDSG--------GRSDLSYSVECRMCSTPGSPCTLCSDGV-----------NYR------PSQ 389

  Fly   433 LVIIQRGTLFFHLNPRLCYE-KIHQLQG-SLKS-----GENISVADVSPN----SNGERVICGDA 486
            ..|..|....:.|.|...|. .:..|.| |.:|     ||.|::. .|||    .:|.|      
Zfish   390 TGIQGRRVSIWGLRPHTTYSFTVMALNGVSAQSQQGPAGETINIT-TSPNVPVLVSGLR------ 447

  Fly   487 VRSLNPKVEDLNSTAVRIILDYMDWEGMETLIGYSYHYKEAPVQN---VTMYDGRHGC----GHD 544
                       .|||.         |...||      |...|.|:   :..|..|: |    |.:
Zfish   448 -----------KSTAT---------ESSLTL------YWNTPTQSHYRILQYQIRY-CEKERGSE 485

  Fly   545 NWLMDVVPNQSRRHVISGLKPYTQYAYFVKTLTRTEYHIQIDAYSKIGYFQTLPDR---PSPVLR 606
            ......:.:.:...|:|.|:..|||...|:..|...|    .::.|...|:||||.   .||:| 
Zfish   486 ENSCHYMESNNNEVVLSDLRRATQYEVQVRARTFAGY----GSFGKAILFRTLPDEDDSSSPLL- 545

  Fly   607 IYGSSEISSQILLHWWPPRRPNGVIKNYFVTAEKYNATK--EAKDKN-----------YVN---- 654
            :.|.......:||..        ||........|.|..|  |..|||           |::    
Zfish   546 VTGILIAMGMLLLII--------VIGAAIYCIRKQNNYKDPELSDKNGQYLMGQGVKVYIDPFTY 602

  Fly   655 -----VELENAKDIDCECAGV 670
                 ...|.||:||..|..:
Zfish   603 EDPNEAVREFAKEIDVSCVKI 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_650408.1 Recep_L_domain 58..173 CDD:460032 3/7 (43%)
Furin-like 210..332 CDD:395614 31/161 (19%)
Recep_L_domain 347..461 CDD:460032 20/127 (16%)
FN3 491..578 CDD:214495 20/93 (22%)
ephb4aNP_571489.1 EphR_LBD 26..199 CDD:470656 19/87 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..340 3/24 (13%)
fn3 339..418 CDD:394996 18/110 (16%)
FN3 440..533 CDD:238020 26/129 (20%)
EphA2_TM 547..618 CDD:464211 17/78 (22%)
PTKc_EphR_B 616..884 CDD:173638 3/8 (38%)
SAM_EPH-B4 914..980 CDD:188953
Blue background indicates that the domain is not in the aligned region.

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