DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdr and EPHA3

DIOPT Version :10

Sequence 1:NP_650408.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_005224.2 Gene:EPHA3 / 2042 HGNCID:3387 Length:983 Species:Homo sapiens


Alignment Length:238 Identity:57/238 - (23%)
Similarity:85/238 - (35%) Gaps:66/238 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 QLQGSL--KSGENISVADVSPNSNGERVICGDAVRSLNPKVEDLNSTAVRIILDY---MDWEGME 515
            |..||:  :...|...||..|.|    :.|.....|....:.::|.|:|  |||:   :|..|.:
Human   297 QEDGSMNCRCENNYFRADKDPPS----MACTRPPSSPRNVISNINETSV--ILDWSWPLDTGGRK 355

  Fly   516 TL--------IGYSYHYKEAPVQNVTMYDGRHGCGHDNWLMDVVPNQSRRHVISGLKPYTQYAYF 572
            .:        .|::....|....||..                :|.|      .||...|  ...
Human   356 DVTFNIICKKCGWNIKQCEPCSPNVRF----------------LPRQ------FGLTNTT--VTV 396

  Fly   573 VKTLTRTEYHIQIDAYSKIGYFQTLPDR------------PSPVLRIYGSSEISSQILLHWWPPR 625
            ...|..|.|..:|||.:.:....:.|.:            |||||.|.......:.|.|.|..|.
Human   397 TDLLAHTNYTFEIDAVNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSRNSISLSWQEPE 461

  Fly   626 RPNGVIKNYFVTAEKYNATKEAKDKNY-------VNVELENAK 661
            .|||:|.:|.|   || ..|:.::.:|       .||.:.:.|
Human   462 HPNGIILDYEV---KY-YEKQEQETSYTILRARGTNVTISSLK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_650408.1 Recep_L_domain 58..173 CDD:460032
Furin-like 210..332 CDD:395614
Recep_L_domain 347..461 CDD:460032 2/4 (50%)
FN3 491..578 CDD:214495 18/97 (19%)
EPHA3NP_005224.2 EphR_LBD_A3 29..201 CDD:198449
FN3 <323..>543 CDD:442628 48/208 (23%)
FN3 437..528 CDD:238020 23/68 (34%)
EphA2_TM 555..618 CDD:464211
PTKc_EphR_A 616..882 CDD:270651
SAM_superfamily 912..974 CDD:472832
PDZ-binding. /evidence=ECO:0000255 981..983
Blue background indicates that the domain is not in the aligned region.

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