DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdr and Ephb2

DIOPT Version :10

Sequence 1:NP_650408.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_006538597.1 Gene:Ephb2 / 13844 MGIID:99611 Length:988 Species:Mus musculus


Alignment Length:377 Identity:80/377 - (21%)
Similarity:132/377 - (35%) Gaps:107/377 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 VEDLNSTAVRIILDY---MDWEGMETLIGYSYHYKEAPVQNVTMYDGRHGCGH--DNWLMDVVPN 553
            :..:|.|:  ::|::   .|..|.|.|: |:...|...       .||..|..  ||  :...|.
Mouse   332 ISSVNETS--LMLEWTPPRDSGGREDLV-YNIICKSCG-------SGRGACTRCGDN--VQYAPR 384

  Fly   554 Q----SRRHVISGLKPYTQYAYFVKTLT----RTEYHIQIDAYSKIGYFQTLPDRPSPVLRIYGS 610
            |    ..|..||.|..:|||.:.::.:.    ::.:..|..:.:    ..|....||.|..::..
Mouse   385 QLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVN----ITTNQAAPSAVSIMHQV 445

  Fly   611 SEISSQILLHWWPPRRPNGVIKNYFV------TAEKYNATKEAKDKNYVNVELENAKDI---DCE 666
            |.....|.|.|..|.:|||||.:|.:      ...:||||......|.|.|:...|..|   ...
Mouse   446 SRTVDSITLSWSQPDQPNGVILDYELQYYEKQELSEYNATAIKSPTNTVTVQGLKAGAIYVFQVR 510

  Fly   667 CAGVLPY--YSGPQPDDEDYYNKEQITYEDALPNLIYVSRNHDYRRKEFEKVINYEHLLSIKKDE 729
            ...|..|  |||                                 :..|:.:...|:..|||:  
Mouse   511 ARTVAGYGRYSG---------------------------------KMYFQTMTEAEYQTSIKE-- 540

  Fly   730 EPTRPPT---TTPAPTNATLAKERLAAINYENYRLNSEKKQRDLQDLDQHKYTIRHALP------ 785
               :.|.   ::.|.....:|...:|.:.  |.|...|:...:..|..|| ||..|..|      
Mouse   541 ---KLPLIVGSSAAGLVFLIAVVVIAIVC--NRRRGFERADSEYTDKLQH-YTSGHMTPGMKIYI 599

  Fly   786 ---KCQNSHASV---VQQVEEKCVAEEPLSG-----------YELPGTQHFY 820
               ..::.:.:|   .::::..||..|.:.|           .:|||.:..:
Mouse   600 DPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdrNP_650408.1 Recep_L_domain 58..173 CDD:460032
Furin-like 210..332 CDD:395614
Recep_L_domain 347..461 CDD:460032
FN3 491..578 CDD:214495 23/96 (24%)
Ephb2XP_006538597.1 EphR_LBD_B2 19..196 CDD:198445
fn3 326..421 CDD:394996 23/100 (23%)
fn3 437..521 CDD:394996 24/83 (29%)
EphA2_TM 545..619 CDD:464211 14/76 (18%)
PTKc_EphR_B 618..886 CDD:173638 7/34 (21%)
SAM_EPH-B2 912..982 CDD:188951
Blue background indicates that the domain is not in the aligned region.

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