DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5b and RPS5B

DIOPT Version :9

Sequence 1:NP_650407.1 Gene:RpS5b / 41807 FlyBaseID:FBgn0038277 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001031502.1 Gene:RPS5B / 818304 AraportID:AT2G37270 Length:207 Species:Arabidopsis thaliana


Alignment Length:197 Identity:149/197 - (75%)
Similarity:175/197 - (88%) Gaps:3/197 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QEVTEWPEIKLFGRWACDDISISDISLQDYIAVK-EKFARYLPHSAGRYAAKRFRKAQCPIVERL 98
            |::|.  |:|||.||:.||:|::||||.|||.|: .|.|.::||:||||:.||||||||||||||
plant    13 QQLTN--EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERL 75

  Fly    99 TSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQ 163
            |:.|||.||:|||||:|.||||||.||||||:..||:||.::||||||||||:||||.||.||||
plant    76 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQ 140

  Fly   164 AVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKS 228
            |||:||||||||||:|:.|||||||||||||:||||||||||||||||||||||||||:|||||:
plant   141 AVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 205

  Fly   229 NR 230
            ||
plant   206 NR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5bNP_650407.1 uS7_Eukaryote 44..230 CDD:271246 144/186 (77%)
RPS5BNP_001031502.1 uS7_Eukaryote 20..207 CDD:271246 144/186 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 241 1.000 Domainoid score I583
eggNOG 1 0.900 - - E1_COG0049
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 301 1.000 Inparanoid score I783
OMA 1 1.010 - - QHG62189
OrthoDB 1 1.010 - - D1532160at2759
OrthoFinder 1 1.000 - - FOG0003144
OrthoInspector 1 1.000 - - mtm1196
orthoMCL 1 0.900 - - OOG6_100920
Panther 1 1.100 - - LDO PTHR11205
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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