DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS5b and mrps7

DIOPT Version :9

Sequence 1:NP_650407.1 Gene:RpS5b / 41807 FlyBaseID:FBgn0038277 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001028768.1 Gene:mrps7 / 619204 ZFINID:ZDB-GENE-050809-112 Length:228 Species:Danio rerio


Alignment Length:154 Identity:37/154 - (24%)
Similarity:63/154 - (40%) Gaps:24/154 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 PIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSE---------------NPLQVTVNAI 142
            |::.:..:.:|.    :|.|:||..|:....|.|.....|               ||..:...|:
Zfish    75 PLISKFINMMMY----DGNKVLARGIMTQTLETIKRKQVEKYHKSPAAKREEIECNPYAIFHQAM 135

  Fly   143 VNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI-WLICTGAREAAFRNIKTVAECLADELINA 206
            .|..|......|.:.|...:..|.::..||...|: |:|.........|.:  :.|.|:.||:.|
Zfish   136 ENCKPVIGLASIQKGGKFYQVPVPLTDNRRRFMAMKWMITECRTNKQGRTL--MYEKLSQELLAA 198

  Fly   207 AKGSSNSYAIKKKDELERVAKSNR 230
            .....|  .||:|.:|.::|::||
Zfish   199 FANEGN--VIKRKHDLHKMAEANR 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5bNP_650407.1 uS7_Eukaryote 44..230 CDD:271246 35/152 (23%)
mrps7NP_001028768.1 uS7_Mitochondria_Mammalian 22..226 CDD:271249 37/154 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.