DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5b and rps502

DIOPT Version :10

Sequence 1:NP_650407.1 Gene:RpS5b / 41807 FlyBaseID:FBgn0038277 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_594212.1 Gene:rps502 / 2541712 PomBaseID:SPAC328.10C Length:203 Species:Schizosaccharomyces pombe


Alignment Length:218 Identity:141/218 - (64%)
Similarity:167/218 - (76%) Gaps:16/218 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ASQVIPQEQEDWADDVVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPH 77
            |:.:||:|              ..:.|...||||.::..:.:.:.||||.|||.:..  .:.|||
pombe     2 AASIIPKE--------------VSLDETGHIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPH 50

  Fly    78 SAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAI 142
            :|||:..||||||:|.||||||:.|||.||:|||||||.||||||||||.|||.:|||||.|:|:
pombe    51 TAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAV 115

  Fly   143 VNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAA 207
            ...||||||||||.||||||||||||||||||||:.||..|||||||||:|:::||||:|:||||
pombe   116 AACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAA 180

  Fly   208 KGSSNSYAIKKKDELERVAKSNR 230
            |||||||||||||||||||||||
pombe   181 KGSSNSYAIKKKDELERVAKSNR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5bNP_650407.1 uS7_Eukaryote 44..230 CDD:271246 133/185 (72%)
rps502NP_594212.1 uS7_Eukaryote 19..203 CDD:271246 133/185 (72%)

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