DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5b and rps-5

DIOPT Version :10

Sequence 1:NP_650407.1 Gene:RpS5b / 41807 FlyBaseID:FBgn0038277 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_502077.1 Gene:rps-5 / 178012 WormBaseID:WBGene00004474 Length:210 Species:Caenorhabditis elegans


Alignment Length:209 Identity:158/209 - (75%)
Similarity:181/209 - (86%) Gaps:1/209 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EDWADDVVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKR 86
            ::|..:.|.. .|...||.||:.|||:|:...:::|||||.|||.||||.|:||||||||:..:|
 Worm     3 DNWGSENVVA-DAAPATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRR 66

  Fly    87 FRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDS 151
            ||||.|||||||.:.|||.||:|||||:..||||||||||:|||.|||:||.|||::||||||||
 Worm    67 FRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDS 131

  Fly   152 TRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAI 216
            ||||||||||||||||:|||||||||||:|||||||||||:||:|||||||||||||||||||||
 Worm   132 TRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAI 196

  Fly   217 KKKDELERVAKSNR 230
            ||||||||||||||
 Worm   197 KKKDELERVAKSNR 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5bNP_650407.1 uS7_Eukaryote 44..230 CDD:271246 149/185 (81%)
rps-5NP_502077.1 uS7_Eukaryote 25..210 CDD:271246 149/184 (81%)

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