DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5b and LOC1277655

DIOPT Version :10

Sequence 1:NP_650407.1 Gene:RpS5b / 41807 FlyBaseID:FBgn0038277 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_061513681.1 Gene:LOC1277655 / 1277655 VectorBaseID:AGAMI1_011940 Length:233 Species:Anopheles gambiae


Alignment Length:235 Identity:184/235 - (78%)
Similarity:202/235 - (85%) Gaps:7/235 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEEVVESSSQEASQVIPQE-----QEDWADDVVTTMPAQEVTEWPEIKLFGRWACDDISISDIS 60
            |::|..|:..:||:  .|||     |:|.|..|....|..:..|.|||||||||:.|||.|||||
Mosquito     1 MADEAFENFDEEAA--APQEMDDAVQDDQAAQVYEEAPVVQTAELPEIKLFGRWSSDDIDISDIS 63

  Fly    61 LQDYIAVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEI 125
            :.||||||||.|:||||||||||||||||||||||||||:.||||||:|||||.|.|||:|||||
Mosquito    64 VSDYIAVKEKHAKYLPHSAGRYAAKRFRKAQCPIVERLTNSLMMKGRNNGKKLKAVRIVRHAFEI 128

  Fly   126 IHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFR 190
            :||||.|||||:.|:||:||||||||||||||||||||||||||||||||||||:||||||||||
Mosquito   129 MHLLTGENPLQIVVHAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFR 193

  Fly   191 NIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
            ||||||||||||||||||||||||||||||||||||||||
Mosquito   194 NIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5bNP_650407.1 uS7_Eukaryote 44..230 CDD:271246 165/185 (89%)
LOC1277655XP_061513681.1 None

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