DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and atpE

DIOPT Version :10

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_418193.1 Gene:atpE / 948253 ECOCYCID:EG10102 Length:79 Species:Escherichia coli


Alignment Length:60 Identity:18/60 - (30%)
Similarity:31/60 - (51%) Gaps:9/60 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 IFLACA----LSVLGAASGIYMIGCSVAGGGVRSPRIKTKNLISVIFCEAVAIYGLITAI 113
            :::|.|    |:.:|||.||.::|.....|..|.|     :||.::..:...:.||:.||
E. coli     9 LYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQP-----DLIPLLRTQFFIVMGLVDAI 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 18/60 (30%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418
atpENP_418193.1 PRK06876 2..79 CDD:180739 18/60 (30%)
Blue background indicates that the domain is not in the aligned region.

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