DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and OLI1

DIOPT Version :9

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_009319.1 Gene:OLI1 / 854584 SGDID:S000007274 Length:76 Species:Saccharomyces cerevisiae


Alignment Length:65 Identity:18/65 - (27%)
Similarity:31/65 - (47%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GMGIFLACALSVLGAASGIYMIGCSVAGGGVRSPRIK----TKNLISVIFCEAVAIYGLITAILL 115
            |.||   ..:.:|||..||.::..::..|..|:|.||    ...::.....||..::.|:.:.||
Yeast    11 GAGI---STIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLL 72

  Fly   116  115
            Yeast    73  72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_C 56..166 CDD:294318 17/64 (27%)
ATP-synt_C 143..204 CDD:278563
OLI1NP_009319.1 ATP-synt_Fo_c_ATP5G3 8..72 CDD:349422 16/63 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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