DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and AT4G32530

DIOPT Version :10

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001119099.1 Gene:AT4G32530 / 829388 AraportID:AT4G32530 Length:210 Species:Arabidopsis thaliana


Alignment Length:207 Identity:86/207 - (41%)
Similarity:121/207 - (58%) Gaps:35/207 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MVNMGERMGLGWFLYTSNPFLWSGMGIFLACALSVLGAASGIYMIGCSVAGGGVRSPRIKTKNLI 96
            :|.:|.....|..|...:|:.:|.:||.::..:||||||.|||:.|.|:.|..:.:|||.:||||
plant     4 VVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLI 68

  Fly    97 SVIFCEAVAIYGLITAILLSGNVNKFSSVRLITDSTVMATNMFTGFATFGAGLCVGMVNVACG-- 159
            ||||||||||||:|.||:|...:....|.::..     |.::..|:|.|.:|:.||..|:.||  
plant    69 SVIFCEAVAIYGVIVAIILQTKLESVPSSKMYD-----AESLRAGYAIFASGIIVGFANLVCGSV 128

  Fly   160 ----------------------------IAVGIVGSGAALADAANSALFVKILIVEIFGSAIGLF 196
                                        :.|||:||..||:||.||.||||||::||||||:|||
plant   129 STLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLF 193

  Fly   197 GLIVAIYMTSKA 208
            |:||.|.|:::|
plant   194 GVIVGIIMSAQA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 37/61 (61%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418 39/93 (42%)
AT4G32530NP_001119099.1 ATP-synt_Vo_c_ATP6F_rpt1 25..87 CDD:349417 37/61 (61%)
ATP-synt_Vo_c_ATP6F_rpt2 107..201 CDD:349418 39/93 (42%)

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